Non-Coding RNA Search

rfhi4022b_n15.y1

Sequence:


               
               TTTCTTTATATTGCTTACCCTAGTAGGCATTCACAGAGCAGCCTACATGCTTGTGAAACT
AATTTAGTATTATTGTGCTTTCTCTCTCCTTCATATTTTTTATGCAGCATGGAATTCATC
AGCAACTGGAAATAAAGGCTTTTAAAGCAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCTTTATATTGCTTACCCTAGTAGGCATTCACAGAGCAGCCTACATGCTTGTGAAACT
AATTTAGTATTATTGTGCTTTCTCTCTCCTTCATATTTTTTATGCAGCATGGAATTCATC
AGCAACTGGAAATAAAGGCTTTTAAAGCAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               1-163, gnl|bosTau2|chr5 (22823632-22823465)
               

               
               1-163, gnl|canFam2|chr27 (7331336-7331242)
               

               
               1-163, gnl|hg17|chr12 (49078461-49078575)
               

               
               1-163, gnl|loxAfr1|scaffold_47288 (2265-2170)
               

               
               1-163, gnl|mm7|chr15 (99954831-99954995)
               

               
               1-163, gnl|oryCun1|scaffold_187632 (1290-1383)
               

               
               1-163, gnl|panTro1|chr10 (50269899-50270014)
               

               
               1-163, gnl|rheMac2|chr11 (47539425-47539540)
               

               
               1-163, gnl|rn3|chr7 (138797118-138797201)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-163, gnl|bosTau2|chr5 (22823632-22823465)
               

               
               1-163, gnl|canFam2|chr27 (7331336-7331242)
               

               
               1-163, gnl|hg17|chr12 (49078461-49078575)
               

               
               1-163, gnl|loxAfr1|scaffold_47288 (2265-2170)
               

               
               1-163, gnl|mm7|chr15 (99954831-99954995)
               

               
               1-163, gnl|oryCun1|scaffold_187632 (1290-1383)
               

               
               1-163, gnl|panTro1|chr10 (50269899-50270014)
               

               
               1-163, gnl|rheMac2|chr11 (47539425-47539540)
               

               
               1-163, gnl|rn3|chr7 (138797118-138797201)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fhi (0.169578)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)

	1-163, gnl\|bosTau2\|chr5 (22823632-22823465)
	1-163, gnl\|canFam2\|chr27 (7331336-7331242)
	1-163, gnl\|hg17\|chr12 (49078461-49078575)
	1-163, gnl\|loxAfr1\|scaffold_47288 (2265-2170)
	1-163, gnl\|mm7\|chr15 (99954831-99954995)
	1-163, gnl\|oryCun1\|scaffold_187632 (1290-1383)
	1-163, gnl\|panTro1\|chr10 (50269899-50270014)
	1-163, gnl\|rheMac2\|chr11 (47539425-47539540)
	1-163, gnl\|rn3\|chr7 (138797118-138797201)