rfhi4032b_b19.y1
|
CTGTACTTGGCCTTGCGGAACTTCGATGGCCTGGAGGAGATTGACAGAGCTCGGGGGATC
CCCGAACTGGTCAGCCAGAGCCAGGCCGTGGATCCGGAGCAGTTCTCCAGTCAGGACTCC
AACATGATGCTGGAGCAGAAAGCCCCCGTATTCCCACAGCAGTACGCGTCTCAGGCACAA
ATGGCCCCGGGCAGCTACGCTCCCATGCAAGACCCAAACTTCCACACCATGGGCCAGCGG
CCGAGTTACGCCACCCTCCGCATGCAGCCCAGACCGGGCCTCAGGCCCACGGGCCTAGTG
CAGAACCAGCCCAACCAGCTGAGGCTCCAGCTGCAGCATCGCCTCCAAGCACAGCAGAAT
CGCCAGCCACTTATGAATCAAATCAGCAATGTTTCAAATGTGAACTTGACACTGAGGCCT
GGCGTACCCACACAGGCACCTAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTGTACTTGGCCTTGCGGAACTTCGATGGCCTGGAGGAGATTGACAGAGCTCGGGGGATC
CCCGAACTGGTCAGCCAGAGCCAGGCCGTGGATCCGGAGCAGTTCTCCAGTCAGGACTCC
AACATGATGCTGGAGCAGAAAGCCCCCGTATTCCCACAGCAGTACGCGTCTCAGGCACAA
ATGGCCCCGGGCAGCTACGCTCCCATGCAAGACCCAAACTTCCACACCATGGGCCAGCGG
CCGAGTTACGCCACCCTCCGCATGCAGCCCAGACCGGGCCTCAGGCCCACGGGCCTAGTG
CAGAACCAGCCCAACCAGCTGAGGCTCCAGCTGCAGCATCGCCTCCAAGCACAGCAGAAT
CGCCAGCCACTTATGAATCAAATCAGCAATGTTTCAAATGTGAACTTGACACTGAGGCCT
GGCGTACCCACACAGGCACCTAT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
76-357, gnl|bosTau2|chr14 (19747247-19747528) |
|
76-357, gnl|canFam2|chr29 (22268469-22268772) |
|
76-357, gnl|danRer3|chr24 (14784910-14785218) |
|
76-357, gnl|dasNov1|scaffold_11661 (6621-6925) |
|
76-357, gnl|echTel1|scaffold_297569 (131038-130733) |
|
76-357, gnl|fr1|chrUn (285165289-285164974) |
|
76-357, gnl|galGal2|chr2 (115896529-115896823) |
|
76-357, gnl|hg17|chr8 (71203478-71203781) |
|
76-357, gnl|Hg17|chr8 (71203772-71203491) |
|
76-357, gnl|loxAfr1|scaffold_565 (50593-50873) |
|
76-357, gnl|mm7|chr1 (13299096-13299397) |
|
76-357, gnl|Mm7|chr1 (13299389-13299108) |
|
76-357, gnl|monDom2|scaffold_4 (90795214-90794911) |
|
76-357, gnl|oryCun1|scaffold_193112 (30604-30907) |
|
76-357, gnl|panTro1|chr7 (73185770-73186073) |
|
76-357, gnl|rheMac2|chr8 (72725412-72725715) |
|
76-357, gnl|rn3|chr5 (5266909-5266608) |
|
76-357, gnl|tetNig1|chr9 (7504973-7504619) |
|
76-357, gnl|xenTro1|scaffold_245 (121488-121772) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
76-357, gnl|bosTau2|chr14 (19747247-19747528) |
|
76-357, gnl|canFam2|chr29 (22268469-22268772) |
|
76-357, gnl|danRer3|chr24 (14784910-14785218) |
|
76-357, gnl|dasNov1|scaffold_11661 (6621-6925) |
|
76-357, gnl|echTel1|scaffold_297569 (131038-130733) |
|
76-357, gnl|fr1|chrUn (285165289-285164974) |
|
76-357, gnl|galGal2|chr2 (115896529-115896823) |
|
76-357, gnl|hg17|chr8 (71203478-71203781) |
|
76-357, gnl|Hg17|chr8 (71203772-71203491) |
|
76-357, gnl|loxAfr1|scaffold_565 (50593-50873) |
|
76-357, gnl|mm7|chr1 (13299096-13299397) |
|
76-357, gnl|Mm7|chr1 (13299389-13299108) |
|
76-357, gnl|monDom2|scaffold_4 (90795214-90794911) |
|
76-357, gnl|oryCun1|scaffold_193112 (30604-30907) |
|
76-357, gnl|panTro1|chr7 (73185770-73186073) |
|
76-357, gnl|rheMac2|chr8 (72725412-72725715) |
|
76-357, gnl|rn3|chr5 (5266909-5266608) |
|
76-357, gnl|tetNig1|chr9 (7504973-7504619) |
|
76-357, gnl|xenTro1|scaffold_245 (121488-121772) |
