Non-Coding RNA Search

rfli712b_m13.y1

Sequence:


               
               GACGCGGTGTACAGCACAAAAGGTGCTAGTCACTGTCCCACTGGCCTTACTGCAGAAGGG
TGCCATTCAGTTCAATCCACCATTGTCAGACAAGAAGATGAAAGCTATCAACAGCTTAGG
TGCAGGCATCATTGAAAAGATTGCGTTGCAATTTCCTTATAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACGCGGTGTACAGCACAAAAGGTGCTAGTCACTGTCCCACTGGCCTTACTGCAGAAGGG
TGCCATTCAGTTCAATCCACCATTGTCAGACAAGAAGATGAAAGCTATCAACAGCTTAGG
TGCAGGCATCATTGAAAAGATTGCGTTGCAATTTCCTTATAGA

Aligned organism(s): 16 entry(ies)

More info

Aligned organism(s): 16 entry(ies)

Help | Less info


               
               21-139, gnl|bosTau2|chr23 (29733676-29733558)
               

               
               21-139, gnl|canFam2|chr35 (20023021-20023153)
               

               
               21-139, gnl|danRer3|chrNA (101488502-101488304)
               

               
               21-139, gnl|dasNov1|scaffold_43879 (9341-9213)
               

               
               21-139, gnl|echTel1|scaffold_290039 (41109-40964)
               

               
               21-139, gnl|galGal2|chr2 (60102290-60102146)
               

               
               21-139, gnl|hg17|chr6 (18320690-18320834)
               

               
               21-139, gnl|Hg17|chr6 (18320696-18320814)
               

               
               21-139, gnl|mm7|chr13 (46559474-46559614)
               

               
               21-139, gnl|Mm7|chr13 (46559480-46559598)
               

               
               21-139, gnl|monDom2|scaffold_3 (107332735-107332879)
               

               
               21-139, gnl|oryCun1|scaffold_198707 (1039-1183)
               

               
               21-139, gnl|panTro1|chr5 (18692063-18692207)
               

               
               21-139, gnl|rheMac2|chr4 (18257714-18257858)
               

               
               21-139, gnl|rn3|chr17 (23662829-23662690)
               

               
               21-139, gnl|xenTro1|scaffold_64 (992632-992772)

Aligned organism(s): 16 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-139, gnl|bosTau2|chr23 (29733676-29733558)
               

               
               21-139, gnl|canFam2|chr35 (20023021-20023153)
               

               
               21-139, gnl|danRer3|chrNA (101488502-101488304)
               

               
               21-139, gnl|dasNov1|scaffold_43879 (9341-9213)
               

               
               21-139, gnl|echTel1|scaffold_290039 (41109-40964)
               

               
               21-139, gnl|galGal2|chr2 (60102290-60102146)
               

               
               21-139, gnl|hg17|chr6 (18320690-18320834)
               

               
               21-139, gnl|Hg17|chr6 (18320696-18320814)
               

               
               21-139, gnl|mm7|chr13 (46559474-46559614)
               

               
               21-139, gnl|Mm7|chr13 (46559480-46559598)
               

               
               21-139, gnl|monDom2|scaffold_3 (107332735-107332879)
               

               
               21-139, gnl|oryCun1|scaffold_198707 (1039-1183)
               

               
               21-139, gnl|panTro1|chr5 (18692063-18692207)
               

               
               21-139, gnl|rheMac2|chr4 (18257714-18257858)
               

               
               21-139, gnl|rn3|chr17 (23662829-23662690)
               

               
               21-139, gnl|xenTro1|scaffold_64 (992632-992772)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fli (0.202881)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)

	21-139, gnl\|bosTau2\|chr23 (29733676-29733558)
	21-139, gnl\|canFam2\|chr35 (20023021-20023153)
	21-139, gnl\|danRer3\|chrNA (101488502-101488304)
	21-139, gnl\|dasNov1\|scaffold_43879 (9341-9213)
	21-139, gnl\|echTel1\|scaffold_290039 (41109-40964)
	21-139, gnl\|galGal2\|chr2 (60102290-60102146)
	21-139, gnl\|hg17\|chr6 (18320690-18320834)
	21-139, gnl\|Hg17\|chr6 (18320696-18320814)
	21-139, gnl\|mm7\|chr13 (46559474-46559614)
	21-139, gnl\|Mm7\|chr13 (46559480-46559598)
	21-139, gnl\|monDom2\|scaffold_3 (107332735-107332879)
	21-139, gnl\|oryCun1\|scaffold_198707 (1039-1183)
	21-139, gnl\|panTro1\|chr5 (18692063-18692207)
	21-139, gnl\|rheMac2\|chr4 (18257714-18257858)
	21-139, gnl\|rn3\|chr17 (23662829-23662690)
	21-139, gnl\|xenTro1\|scaffold_64 (992632-992772)