Non-Coding RNA Search

rfli718b_o7.y1

Sequence:


               
               CGTGACCCCGTCAACTTCAAGCTGCTGGGCCACTGCCTGCTGGTGACCCTCGCCCGGCAC
TACCCCGGAGACTTCAGCCCCGGCCTGCAGGCCTCGCTGGACAAGTTTCTGAGCCACGTG
ACCTCAGCGCTGGCCCCCCACTGTCGCTAAATCGGGGCGGGGGGGCGTGCGGGGGCTCCA
GGGTTGGAGTAAAGTCTGTGGTCAAAGCCTCaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaa

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGTGACCCCGTCAACTTCAAGCTGCTGGGCCACTGCCTGCTGGTGACCCTCGCCCGGCAC
TACCCCGGAGACTTCAGCCCCGGCCTGCAGGCCTCGCTGGACAAGTTTCTGAGCCACGTG
ACCTCAGCGCTGGCCCCCCACTGTCGCTAAATCGGGGCGGGGGGGCGTGCGGGGGCTCCA
GGGTTGGAGTAAAGTCTGTGGTCAAAGCCTCaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaa

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|204582|gb|AAA41315.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|204582|gb|AAA41315.1|

Aligned organism(s): 13 entry(ies)

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Aligned organism(s): 13 entry(ies)

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               20-203, gnl|bosTau2|chr25 (2636884-2637065)
               

               
               20-203, gnl|danRer3|chr14 (52089398-52089542)
               

               
               20-203, gnl|echTel1|scaffold_304804 (413-270)
               

               
               20-203, gnl|fr1|chrUn (67637342-67637208)
               

               
               20-203, gnl|galGal2|chr14 (13965975-13966102)
               

               
               20-203, gnl|hg17|chr16 (170976-171121)
               

               
               20-203, gnl|Hg17|chr16 (170977-171175)
               

               
               20-203, gnl|loxAfr1|scaffold_49398 (6451-6308)
               

               
               20-203, gnl|mm7|chr17 (24467668-24467524)
               

               
               20-203, gnl|monDom2|scaffold_49 (8234709-8234851)
               

               
               20-203, gnl|oryCun1|scaffold_188163 (1235-1380)
               

               
               20-203, gnl|rheMac2|chr20 (141101-141246)
               

               
               20-203, gnl|rn3|chr10 (15557560-15557415)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               20-203, gnl|bosTau2|chr25 (2636884-2637065)
               

               
               20-203, gnl|danRer3|chr14 (52089398-52089542)
               

               
               20-203, gnl|echTel1|scaffold_304804 (413-270)
               

               
               20-203, gnl|fr1|chrUn (67637342-67637208)
               

               
               20-203, gnl|galGal2|chr14 (13965975-13966102)
               

               
               20-203, gnl|hg17|chr16 (170976-171121)
               

               
               20-203, gnl|Hg17|chr16 (170977-171175)
               

               
               20-203, gnl|loxAfr1|scaffold_49398 (6451-6308)
               

               
               20-203, gnl|mm7|chr17 (24467668-24467524)
               

               
               20-203, gnl|monDom2|scaffold_49 (8234709-8234851)
               

               
               20-203, gnl|oryCun1|scaffold_188163 (1235-1380)
               

               
               20-203, gnl|rheMac2|chr20 (141101-141246)
               

               
               20-203, gnl|rn3|chr10 (15557560-15557415)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fli (0.202881)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)

	20-203, gnl\|bosTau2\|chr25 (2636884-2637065)
	20-203, gnl\|danRer3\|chr14 (52089398-52089542)
	20-203, gnl\|echTel1\|scaffold_304804 (413-270)
	20-203, gnl\|fr1\|chrUn (67637342-67637208)
	20-203, gnl\|galGal2\|chr14 (13965975-13966102)
	20-203, gnl\|hg17\|chr16 (170976-171121)
	20-203, gnl\|Hg17\|chr16 (170977-171175)
	20-203, gnl\|loxAfr1\|scaffold_49398 (6451-6308)
	20-203, gnl\|mm7\|chr17 (24467668-24467524)
	20-203, gnl\|monDom2\|scaffold_49 (8234709-8234851)
	20-203, gnl\|oryCun1\|scaffold_188163 (1235-1380)
	20-203, gnl\|rheMac2\|chr20 (141101-141246)
	20-203, gnl\|rn3\|chr10 (15557560-15557415)