Non-Coding RNA Search

rfli739b_f15.y1

Sequence:


               
               TGCTTCCGAAAGCTAGGTGCCCGCTGGTATCCCTGTCATACATACCCAGAGCTGCCTCGG
CTGCATTTCCATATGGTGGGGTGTTGGCTGGAACCTTGGAGAATGCTTCCTTCTGGGAGC
TGAAAGTGGGCTTTACTCATTGGCCGCATGTGCTACCCATAGAGCCTGGGGGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCTTCCGAAAGCTAGGTGCCCGCTGGTATCCCTGTCATACATACCCAGAGCTGCCTCGG
CTGCATTTCCATATGGTGGGGTGTTGGCTGGAACCTTGGAGAATGCTTCCTTCTGGGAGC
TGAAAGTGGGCTTTACTCATTGGCCGCATGTGCTACCCATAGAGCCTGGGGGCTG

Aligned organism(s): 18 entry(ies)

More info

Aligned organism(s): 18 entry(ies)

Help | Less info


               
               15-175, gnl|bosTau2|chr18 (958546-958386)
               

               
               15-175, gnl|canFam2|chr5 (79000598-79000359)
               

               
               15-175, gnl|danRer3|chrUn (183880289-183880518)
               

               
               15-175, gnl|dasNov1|scaffold_122831 (428-667)
               

               
               15-175, gnl|fr1|chrUn (132089336-132089111)
               

               
               15-175, gnl|galGal2|chr11 (1776569-1776804)
               

               
               15-175, gnl|hg17|chr16 (73219837-73220076)
               

               
               15-175, gnl|Hg17|chr16 (73220067-73219907)
               

               
               15-175, gnl|loxAfr1|scaffold_15291 (56154-56393)
               

               
               15-175, gnl|mm7|chr8 (109876252-109876490)
               

               
               15-175, gnl|Mm7|chr8 (109876481-109876321)
               

               
               15-175, gnl|monDom2|scaffold_63 (10170122-10170370)
               

               
               15-175, gnl|oryCun1|scaffold_86479 (7957-8196)
               

               
               15-175, gnl|panTro1|chr18 (67608561-67608800)
               

               
               15-175, gnl|rheMac2|chr20 (72730956-72731195)
               

               
               15-175, gnl|rn3|chr19 (41200136-41200372)
               

               
               15-175, gnl|tetNig1|chrUn_random (26085087-26084864)
               

               
               15-175, gnl|xenTro1|scaffold_387 (225167-225404)

Aligned organism(s): 18 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-175, gnl|bosTau2|chr18 (958546-958386)
               

               
               15-175, gnl|canFam2|chr5 (79000598-79000359)
               

               
               15-175, gnl|danRer3|chrUn (183880289-183880518)
               

               
               15-175, gnl|dasNov1|scaffold_122831 (428-667)
               

               
               15-175, gnl|fr1|chrUn (132089336-132089111)
               

               
               15-175, gnl|galGal2|chr11 (1776569-1776804)
               

               
               15-175, gnl|hg17|chr16 (73219837-73220076)
               

               
               15-175, gnl|Hg17|chr16 (73220067-73219907)
               

               
               15-175, gnl|loxAfr1|scaffold_15291 (56154-56393)
               

               
               15-175, gnl|mm7|chr8 (109876252-109876490)
               

               
               15-175, gnl|Mm7|chr8 (109876481-109876321)
               

               
               15-175, gnl|monDom2|scaffold_63 (10170122-10170370)
               

               
               15-175, gnl|oryCun1|scaffold_86479 (7957-8196)
               

               
               15-175, gnl|panTro1|chr18 (67608561-67608800)
               

               
               15-175, gnl|rheMac2|chr20 (72730956-72731195)
               

               
               15-175, gnl|rn3|chr19 (41200136-41200372)
               

               
               15-175, gnl|tetNig1|chrUn_random (26085087-26084864)
               

               
               15-175, gnl|xenTro1|scaffold_387 (225167-225404)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fli (0.202881)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)

	15-175, gnl\|bosTau2\|chr18 (958546-958386)
	15-175, gnl\|canFam2\|chr5 (79000598-79000359)
	15-175, gnl\|danRer3\|chrUn (183880289-183880518)
	15-175, gnl\|dasNov1\|scaffold_122831 (428-667)
	15-175, gnl\|fr1\|chrUn (132089336-132089111)
	15-175, gnl\|galGal2\|chr11 (1776569-1776804)
	15-175, gnl\|hg17\|chr16 (73219837-73220076)
	15-175, gnl\|Hg17\|chr16 (73220067-73219907)
	15-175, gnl\|loxAfr1\|scaffold_15291 (56154-56393)
	15-175, gnl\|mm7\|chr8 (109876252-109876490)
	15-175, gnl\|Mm7\|chr8 (109876481-109876321)
	15-175, gnl\|monDom2\|scaffold_63 (10170122-10170370)
	15-175, gnl\|oryCun1\|scaffold_86479 (7957-8196)
	15-175, gnl\|panTro1\|chr18 (67608561-67608800)
	15-175, gnl\|rheMac2\|chr20 (72730956-72731195)
	15-175, gnl\|rn3\|chr19 (41200136-41200372)
	15-175, gnl\|tetNig1\|chrUn_random (26085087-26084864)
	15-175, gnl\|xenTro1\|scaffold_387 (225167-225404)