Non-Coding RNA Search

rfty513b_h19r1.y1

Sequence:


               
               GAAAGAAAAAAGACATGCAGGATGCCCAGCTCAATCTCAGACCCTGGGAAAATCCTCCGG
TCACAGGCCACAGCCGCATCCACAGAGTGAAAACATGCTACCGTCCCCGTTCCGCCTGCA
AACCGTGCACCTTGCTCCGCAGCGGGCACTGGGCTTTGCGGAGCAGAAACATCGCTGGTC
CGGGCCCATCCTGCATTCCAGCCTCCTGTACTGGGGGCTCCCATTAGCCCCGCTCCGCTC
CCTGCCAGACTCCCCACCGAGCTTTTGGGCTTTTGTCAGCTCGAGACAGCCCTTGAAAAC
CGTGCAAGCTGAGGGGGTGTGTGTCTAATAAAGTTCAAGCTCTGTAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAGAAAAAAGACATGCAGGATGCCCAGCTCAATCTCAGACCCTGGGAAAATCCTCCGG
TCACAGGCCACAGCCGCATCCACAGAGTGAAAACATGCTACCGTCCCCGTTCCGCCTGCA
AACCGTGCACCTTGCTCCGCAGCGGGCACTGGGCTTTGCGGAGCAGAAACATCGCTGGTC
CGGGCCCATCCTGCATTCCAGCCTCCTGTACTGGGGGCTCCCATTAGCCCCGCTCCGCTC
CCTGCCAGACTCCCCACCGAGCTTTTGGGCTTTTGTCAGCTCGAGACAGCCCTTGAAAAC
CGTGCAAGCTGAGGGGGTGTGTGTCTAATAAAGTTCAAGCTCTGTAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               161-347, gnl|bosTau2|chr19 (48449570-48449383)
               

               
               161-347, gnl|canFam2|chr9 (6484738-6484221)
               

               
               161-347, gnl|dasNov1|scaffold_8400 (85428-85943)
               

               
               161-347, gnl|echTel1|scaffold_101850 (1764-1210)
               

               
               161-347, gnl|hg17|chr17 (73020066-73020578)
               

               
               161-347, gnl|Hg17|chr17 (73020097-73020291)
               

               
               161-347, gnl|loxAfr1|scaffold_9227 (44711-45222)
               

               
               161-347, gnl|mm7|chr11 (117479370-117479857)
               

               
               161-347, gnl|Mm7|chr11 (117479403-117479572)
               

               
               161-347, gnl|panTro1|chr19 (76515719-76516231)
               

               
               161-347, gnl|rheMac2|chr16 (72829387-72829904)
               

               
               161-347, gnl|rn3|chr10 (107503104-107503596)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               161-347, gnl|bosTau2|chr19 (48449570-48449383)
               

               
               161-347, gnl|canFam2|chr9 (6484738-6484221)
               

               
               161-347, gnl|dasNov1|scaffold_8400 (85428-85943)
               

               
               161-347, gnl|echTel1|scaffold_101850 (1764-1210)
               

               
               161-347, gnl|hg17|chr17 (73020066-73020578)
               

               
               161-347, gnl|Hg17|chr17 (73020097-73020291)
               

               
               161-347, gnl|loxAfr1|scaffold_9227 (44711-45222)
               

               
               161-347, gnl|mm7|chr11 (117479370-117479857)
               

               
               161-347, gnl|Mm7|chr11 (117479403-117479572)
               

               
               161-347, gnl|panTro1|chr19 (76515719-76516231)
               

               
               161-347, gnl|rheMac2|chr16 (72829387-72829904)
               

               
               161-347, gnl|rn3|chr10 (107503104-107503596)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               fty (0.17584)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)

	161-347, gnl\|bosTau2\|chr19 (48449570-48449383)
	161-347, gnl\|canFam2\|chr9 (6484738-6484221)
	161-347, gnl\|dasNov1\|scaffold_8400 (85428-85943)
	161-347, gnl\|echTel1\|scaffold_101850 (1764-1210)
	161-347, gnl\|hg17\|chr17 (73020066-73020578)
	161-347, gnl\|Hg17\|chr17 (73020097-73020291)
	161-347, gnl\|loxAfr1\|scaffold_9227 (44711-45222)
	161-347, gnl\|mm7\|chr11 (117479370-117479857)
	161-347, gnl\|Mm7\|chr11 (117479403-117479572)
	161-347, gnl\|panTro1\|chr19 (76515719-76516231)
	161-347, gnl\|rheMac2\|chr16 (72829387-72829904)
	161-347, gnl\|rn3\|chr10 (107503104-107503596)