Non-Coding RNA Search

rfty514b_n4r1.y1

Sequence:


               
               GAACAACCTCTTAAAATATTAGACAGACTGGCTCTTGATATAACACCTGACTCATGGGAG
TGATAGACGAAGTTGTCTTTACCATAAGTATTAGCTGCATTTATGATTTAGAAAGCACTA
ATTACATTGATTAAAGGGCTTTAAATAAGAGAATGTTCTTGCCTGAGAACTTCTGGACTA
AGTAAATGGCTGGAGTGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACAACCTCTTAAAATATTAGACAGACTGGCTCTTGATATAACACCTGACTCATGGGAG
TGATAGACGAAGTTGTCTTTACCATAAGTATTAGCTGCATTTATGATTTAGAAAGCACTA
ATTACATTGATTAAAGGGCTTTAAATAAGAGAATGTTCTTGCCTGAGAACTTCTGGACTA
AGTAAATGGCTGGAGTGTC

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               1-199, gnl|bosTau2|chr3 (10693151-10693345)
               

               
               1-199, gnl|canFam2|chr7 (44860157-44859888)
               

               
               1-199, gnl|dasNov1|scaffold_6721 (10216-9996)
               

               
               1-199, gnl|echTel1|scaffold_283020 (47387-47148)
               

               
               1-199, gnl|hg17|chr1 (152700787-152700981)
               

               
               1-199, gnl|loxAfr1|scaffold_18277 (37768-38000)
               

               
               1-199, gnl|monDom2|scaffold_59 (1638228-1638001)
               

               
               1-199, gnl|oryCun1|scaffold_213975 (4538-4306)
               

               
               1-199, gnl|panTro1|chr1 (134633525-134633719)
               

               
               1-199, gnl|rheMac2|chr1 (134490040-134490234)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-199, gnl|bosTau2|chr3 (10693151-10693345)
               

               
               1-199, gnl|canFam2|chr7 (44860157-44859888)
               

               
               1-199, gnl|dasNov1|scaffold_6721 (10216-9996)
               

               
               1-199, gnl|echTel1|scaffold_283020 (47387-47148)
               

               
               1-199, gnl|hg17|chr1 (152700787-152700981)
               

               
               1-199, gnl|loxAfr1|scaffold_18277 (37768-38000)
               

               
               1-199, gnl|monDom2|scaffold_59 (1638228-1638001)
               

               
               1-199, gnl|oryCun1|scaffold_213975 (4538-4306)
               

               
               1-199, gnl|panTro1|chr1 (134633525-134633719)
               

               
               1-199, gnl|rheMac2|chr1 (134490040-134490234)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               fty (0.17584)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)

	1-199, gnl\|bosTau2\|chr3 (10693151-10693345)
	1-199, gnl\|canFam2\|chr7 (44860157-44859888)
	1-199, gnl\|dasNov1\|scaffold_6721 (10216-9996)
	1-199, gnl\|echTel1\|scaffold_283020 (47387-47148)
	1-199, gnl\|hg17\|chr1 (152700787-152700981)
	1-199, gnl\|loxAfr1\|scaffold_18277 (37768-38000)
	1-199, gnl\|monDom2\|scaffold_59 (1638228-1638001)
	1-199, gnl\|oryCun1\|scaffold_213975 (4538-4306)
	1-199, gnl\|panTro1\|chr1 (134633525-134633719)
	1-199, gnl\|rheMac2\|chr1 (134490040-134490234)