Non-Coding RNA Search

rfty520b_e13.y1

Sequence:


               
               CCAGGCCGTATGTGCTTGGCAGAGAAATCAAAGCTTGTTTAGGCCCAAGAGATTTGGAAC
TTTAAGGTTGAGACTTCAAGCCTCCCCATATTCTAGGAGAGGAACAAGGGGTCTGTTCTT
GCTCAAACCATCTGGATAGAAACTGAGTCAGGCACTGAGTGGGATGCTTCCAAGATACAC
AAGGATGCCTACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAGGCCGTATGTGCTTGGCAGAGAAATCAAAGCTTGTTTAGGCCCAAGAGATTTGGAAC
TTTAAGGTTGAGACTTCAAGCCTCCCCATATTCTAGGAGAGGAACAAGGGGTCTGTTCTT
GCTCAAACCATCTGGATAGAAACTGAGTCAGGCACTGAGTGGGATGCTTCCAAGATACAC
AAGGATGCCTACT

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

Help | Less info


               
               1-190, gnl|bosTau2|chr7 (48166163-48165975)
               

               
               1-190, gnl|canFam2|chr4 (56107299-56107102)
               

               
               1-190, gnl|echTel1|scaffold_325238 (90371-90552)
               

               
               1-190, gnl|hg17|chr5 (156613222-156613418)
               

               
               1-190, gnl|Hg17|chr5 (156613256-156613442)
               

               
               1-190, gnl|mm7|chr11 (46283354-46283187)
               

               
               1-190, gnl|Mm7|chr11 (46283342-46283162)
               

               
               1-190, gnl|monDom2|scaffold_6 (48211847-48211667)
               

               
               1-190, gnl|panTro1|chr4 (163623168-163623364)
               

               
               1-190, gnl|rheMac2|chr6 (153627041-153627237)
               

               
               1-190, gnl|rn3|chr10 (31458397-31458277)

Aligned organism(s): 11 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-190, gnl|bosTau2|chr7 (48166163-48165975)
               

               
               1-190, gnl|canFam2|chr4 (56107299-56107102)
               

               
               1-190, gnl|echTel1|scaffold_325238 (90371-90552)
               

               
               1-190, gnl|hg17|chr5 (156613222-156613418)
               

               
               1-190, gnl|Hg17|chr5 (156613256-156613442)
               

               
               1-190, gnl|mm7|chr11 (46283354-46283187)
               

               
               1-190, gnl|Mm7|chr11 (46283342-46283162)
               

               
               1-190, gnl|monDom2|scaffold_6 (48211847-48211667)
               

               
               1-190, gnl|panTro1|chr4 (163623168-163623364)
               

               
               1-190, gnl|rheMac2|chr6 (153627041-153627237)
               

               
               1-190, gnl|rn3|chr10 (31458397-31458277)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fty (0.17584)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)

	1-190, gnl\|bosTau2\|chr7 (48166163-48165975)
	1-190, gnl\|canFam2\|chr4 (56107299-56107102)
	1-190, gnl\|echTel1\|scaffold_325238 (90371-90552)
	1-190, gnl\|hg17\|chr5 (156613222-156613418)
	1-190, gnl\|Hg17\|chr5 (156613256-156613442)
	1-190, gnl\|mm7\|chr11 (46283354-46283187)
	1-190, gnl\|Mm7\|chr11 (46283342-46283162)
	1-190, gnl\|monDom2\|scaffold_6 (48211847-48211667)
	1-190, gnl\|panTro1\|chr4 (163623168-163623364)
	1-190, gnl\|rheMac2\|chr6 (153627041-153627237)
	1-190, gnl\|rn3\|chr10 (31458397-31458277)