Non-Coding RNA Search

rfty522b_h20r1.y1

Sequence:


               
               AAGCCGGAGCTCATCACCTGCCAACCTGGTCCAGGTCTTCGATGCTTTCACCCCAAGGCT
TCAGTGATTCCAACAAGAAAGTGAACCAGTGGGCACTGGAGTCCCTCGCCGAGATGATCC
CCCTCCTGAGAGAGAGCTTGCACCCCATGCTGCTGTCTGTCATCATCGCTGTGGCAGACA
ACCTCAACTCCAAGAACGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGCCGGAGCTCATCACCTGCCAACCTGGTCCAGGTCTTCGATGCTTTCACCCCAAGGCT
TCAGTGATTCCAACAAGAAAGTGAACCAGTGGGCACTGGAGTCCCTCGCCGAGATGATCC
CCCTCCTGAGAGAGAGCTTGCACCCCATGCTGCTGTCTGTCATCATCGCTGTGGCAGACA
ACCTCAACTCCAAGAACGC

Aligned organism(s): 18 entry(ies)

More info

Aligned organism(s): 18 entry(ies)

Help | Less info


               
               33-199, gnl|bosTau2|chr11 (50417438-50417603)
               

               
               33-199, gnl|canFam2|chr17 (25983383-25983650)
               

               
               33-199, gnl|danRer3|chrUn (17621988-17622242)
               

               
               33-199, gnl|dasNov1|scaffold_230655 (3876-3609)
               

               
               33-199, gnl|echTel1|scaffold_312704 (2837-3104)
               

               
               33-199, gnl|fr1|chrUn (59908206-59907968)
               

               
               33-199, gnl|galGal2|chr3 (8621000-8621245)
               

               
               33-199, gnl|hg17|chr2 (29171013-29171280)
               

               
               33-199, gnl|Hg17|chr2 (29171056-29171221)
               

               
               33-199, gnl|mm7|chr17 (69998583-69998846)
               

               
               33-199, gnl|Mm7|chr17 (69998622-69998787)
               

               
               33-199, gnl|monDom2|scaffold_1 (146572843-146572573)
               

               
               33-199, gnl|oryCun1|scaffold_212134 (3231-3498)
               

               
               33-199, gnl|panTro1|chr12 (30131491-30131758)
               

               
               33-199, gnl|rheMac2|chr13 (29033710-29033977)
               

               
               33-199, gnl|rn3|chr6 (23893927-23893669)
               

               
               33-199, gnl|tetNig1|chr10 (3720748-3720500)
               

               
               33-199, gnl|xenTro1|scaffold_725 (618886-618647)

Aligned organism(s): 18 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               33-199, gnl|bosTau2|chr11 (50417438-50417603)
               

               
               33-199, gnl|canFam2|chr17 (25983383-25983650)
               

               
               33-199, gnl|danRer3|chrUn (17621988-17622242)
               

               
               33-199, gnl|dasNov1|scaffold_230655 (3876-3609)
               

               
               33-199, gnl|echTel1|scaffold_312704 (2837-3104)
               

               
               33-199, gnl|fr1|chrUn (59908206-59907968)
               

               
               33-199, gnl|galGal2|chr3 (8621000-8621245)
               

               
               33-199, gnl|hg17|chr2 (29171013-29171280)
               

               
               33-199, gnl|Hg17|chr2 (29171056-29171221)
               

               
               33-199, gnl|mm7|chr17 (69998583-69998846)
               

               
               33-199, gnl|Mm7|chr17 (69998622-69998787)
               

               
               33-199, gnl|monDom2|scaffold_1 (146572843-146572573)
               

               
               33-199, gnl|oryCun1|scaffold_212134 (3231-3498)
               

               
               33-199, gnl|panTro1|chr12 (30131491-30131758)
               

               
               33-199, gnl|rheMac2|chr13 (29033710-29033977)
               

               
               33-199, gnl|rn3|chr6 (23893927-23893669)
               

               
               33-199, gnl|tetNig1|chr10 (3720748-3720500)
               

               
               33-199, gnl|xenTro1|scaffold_725 (618886-618647)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fty (0.17584)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)

	33-199, gnl\|bosTau2\|chr11 (50417438-50417603)
	33-199, gnl\|canFam2\|chr17 (25983383-25983650)
	33-199, gnl\|danRer3\|chrUn (17621988-17622242)
	33-199, gnl\|dasNov1\|scaffold_230655 (3876-3609)
	33-199, gnl\|echTel1\|scaffold_312704 (2837-3104)
	33-199, gnl\|fr1\|chrUn (59908206-59907968)
	33-199, gnl\|galGal2\|chr3 (8621000-8621245)
	33-199, gnl\|hg17\|chr2 (29171013-29171280)
	33-199, gnl\|Hg17\|chr2 (29171056-29171221)
	33-199, gnl\|mm7\|chr17 (69998583-69998846)
	33-199, gnl\|Mm7\|chr17 (69998622-69998787)
	33-199, gnl\|monDom2\|scaffold_1 (146572843-146572573)
	33-199, gnl\|oryCun1\|scaffold_212134 (3231-3498)
	33-199, gnl\|panTro1\|chr12 (30131491-30131758)
	33-199, gnl\|rheMac2\|chr13 (29033710-29033977)
	33-199, gnl\|rn3\|chr6 (23893927-23893669)
	33-199, gnl\|tetNig1\|chr10 (3720748-3720500)
	33-199, gnl\|xenTro1\|scaffold_725 (618886-618647)