Non-Coding RNA Search

rfty536b_h1.y1

Sequence:


               
               ACACAAAATGGCGGCGGCTTAGCTCCTACCCCTGGCGGCGGCGGCAGCGGTGGCGGAGGC
GACGGCACCTCCTCCAGGCGGCAGCCGCGGCTTCTTTCTCAGGCAGCGGCAGCGCCCCTG
GCAGGCGCGGTGGTGGTGGCGCGCGGCCAGATTTACCTGAAGATCTGGACAATCTTTTTT
TGTCATGGACTGTTAAAACACTTGGAGTTCTAATTCTGGTCTTGATTTCCTAATGAAAGA
TGTTCTCCACCTGAATGCAGTTTTTCCTGTTGGTCAAATAAGACAACTATCAACATTGCC
TGTTTGTCCTCTTTTTAATCTCTAAAGGATGGATGTTTGTAAGATGTTGCTTACTCTGTT
CTGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACACAAAATGGCGGCGGCTTAGCTCCTACCCCTGGCGGCGGCGGCAGCGGTGGCGGAGGC
GACGGCACCTCCTCCAGGCGGCAGCCGCGGCTTCTTTCTCAGGCAGCGGCAGCGCCCCTG
GCAGGCGCGGTGGTGGTGGCGCGCGGCCAGATTTACCTGAAGATCTGGACAATCTTTTTT
TGTCATGGACTGTTAAAACACTTGGAGTTCTAATTCTGGTCTTGATTTCCTAATGAAAGA
TGTTCTCCACCTGAATGCAGTTTTTCCTGTTGGTCAAATAAGACAACTATCAACATTGCC
TGTTTGTCCTCTTTTTAATCTCTAAAGGATGGATGTTTGTAAGATGTTGCTTACTCTGTT
CTGGA

Aligned organism(s): 17 entry(ies)

More info

Aligned organism(s): 17 entry(ies)

Help | Less info


               
               1-150, gnl|bosTau2|chr28 (24276247-24276098)
               

               
               1-150, gnl|Hg17|chr10 (76256404-76256549)
               

               
               1-150, gnl|Mm7|chr14 (19159602-19159751)
               


               
               218-365, gnl|bosTau2|chr28 (24262580-24262433)
               

               
               218-365, gnl|canFam2|chr4 (28342119-28342312)
               

               
               218-365, gnl|danRer3|chr13 (27944649-27944472)
               

               
               218-365, gnl|dasNov1|scaffold_4520 (103276-103083)
               

               
               218-365, gnl|echTel1|scaffold_318326 (43863-43664)
               

               
               218-365, gnl|galGal2|chr6 (14326908-14326699)
               

               
               218-365, gnl|hg17|chr10 (76272361-76272557)
               

               
               218-365, gnl|Hg17|chr10 (76272363-76272510)
               

               
               218-365, gnl|mm7|chr14 (19175296-19175483)
               

               
               218-365, gnl|Mm7|chr14 (19175298-19175440)
               

               
               218-365, gnl|monDom2|scaffold_14 (2893596-2893801)
               

               
               218-365, gnl|panTro1|chr8 (77529230-77529426)
               

               
               218-365, gnl|rheMac2|chr9 (62160718-62160522)
               

               
               218-365, gnl|rn3|chr15 (2999203-2999008)

Aligned organism(s): 17 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-150, gnl|bosTau2|chr28 (24276247-24276098)
               

               
               1-150, gnl|Hg17|chr10 (76256404-76256549)
               

               
               1-150, gnl|Mm7|chr14 (19159602-19159751)
               


               
               218-365, gnl|bosTau2|chr28 (24262580-24262433)
               

               
               218-365, gnl|canFam2|chr4 (28342119-28342312)
               

               
               218-365, gnl|danRer3|chr13 (27944649-27944472)
               

               
               218-365, gnl|dasNov1|scaffold_4520 (103276-103083)
               

               
               218-365, gnl|echTel1|scaffold_318326 (43863-43664)
               

               
               218-365, gnl|galGal2|chr6 (14326908-14326699)
               

               
               218-365, gnl|hg17|chr10 (76272361-76272557)
               

               
               218-365, gnl|Hg17|chr10 (76272363-76272510)
               

               
               218-365, gnl|mm7|chr14 (19175296-19175483)
               

               
               218-365, gnl|Mm7|chr14 (19175298-19175440)
               

               
               218-365, gnl|monDom2|scaffold_14 (2893596-2893801)
               

               
               218-365, gnl|panTro1|chr8 (77529230-77529426)
               

               
               218-365, gnl|rheMac2|chr9 (62160718-62160522)
               

               
               218-365, gnl|rn3|chr15 (2999203-2999008)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fty (0.17584)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)

	1-150, gnl\|bosTau2\|chr28 (24276247-24276098)
	1-150, gnl\|Hg17\|chr10 (76256404-76256549)
	1-150, gnl\|Mm7\|chr14 (19159602-19159751)

	218-365, gnl\|bosTau2\|chr28 (24262580-24262433)
	218-365, gnl\|canFam2\|chr4 (28342119-28342312)
	218-365, gnl\|danRer3\|chr13 (27944649-27944472)
	218-365, gnl\|dasNov1\|scaffold_4520 (103276-103083)
	218-365, gnl\|echTel1\|scaffold_318326 (43863-43664)
	218-365, gnl\|galGal2\|chr6 (14326908-14326699)
	218-365, gnl\|hg17\|chr10 (76272361-76272557)
	218-365, gnl\|Hg17\|chr10 (76272363-76272510)
	218-365, gnl\|mm7\|chr14 (19175296-19175483)
	218-365, gnl\|Mm7\|chr14 (19175298-19175440)
	218-365, gnl\|monDom2\|scaffold_14 (2893596-2893801)
	218-365, gnl\|panTro1\|chr8 (77529230-77529426)
	218-365, gnl\|rheMac2\|chr9 (62160718-62160522)
	218-365, gnl\|rn3\|chr15 (2999203-2999008)