rgul0108_g18.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGGCCCAGTGTAGTATAAAACGTTAATGGATGTCCAGTGCGCATCGTTTCACCGGCTGC TGGCCAGAGGTACTAGGAGTGCGCTGGCAGGAGCACTGGCGAGGATGCACCTTTCCCCTG CCTTGGAAAGGTAGAATTGGGGAGGGCGGGAGGGTGAAGGTGGCCCGGAAAAGAACACCT TCTCCTTACCAAGGGGAGAAAAAGAAAGAAACAAGAAATACAAATATAGCAAAAATGTAT TATTTCAAGCGCCACCCATTCAAAGTTCATCATAATTTAGTCGGTGTCATTTTTACTGAA TTGGGGTGGGGGGGAGCTTTGTCTCTGATTTCCAGTGTGTTTTTGAGTAAGGAAATGTTA ATAAAATCGAGATGAGGAATAAGAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGGCCCAGTGTAGTATAAAACGTTAATGGATGTCCAGTGCGCATCGTTTCACCGGCTGC TGGCCAGAGGTACTAGGAGTGCGCTGGCAGGAGCACTGGCGAGGATGCACCTTTCCCCTG CCTTGGAAAGGTAGAATTGGGGAGGGCGGGAGGGTGAAGGTGGCCCGGAAAAGAACACCT TCTCCTTACCAAGGGGAGAAAAAGAAAGAAACAAGAAATACAAATATAGCAAAAATGTAT TATTTCAAGCGCCACCCATTCAAAGTTCATCATAATTTAGTCGGTGTCATTTTTACTGAA TTGGGGTGGGGGGGAGCTTTGTCTCTGATTTCCAGTGTGTTTTTGAGTAAGGAAATGTTA ATAAAATCGAGATGAGGAATAAGAAAAAAAAAAAAAAAAAAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 78-193, + strand, RNAz p=0.526105 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 78-193, + strand, RNAz p=0.526105 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 2-194, gnl|bosTau2|chr5 (57811072-57810876) | |
| 2-194, gnl|canFam2|chr27 (36622175-36621522) | |
| 2-194, gnl|hg17|chr12 (12769865-12770478) | |
| 2-194, gnl|Hg17|chr12 (12770170-12770361) | |
| 2-194, gnl|loxAfr1|scaffold_24717 (41919-41215) | |
| 2-194, gnl|mm7|chr6 (134943148-134943779) | |
| 2-194, gnl|Mm7|chr6 (134943458-134943661) | |
| 2-194, gnl|monDom2|scaffold_31 (18617975-18617299) | |
| 2-194, gnl|oryCun1|scaffold_203464 (53804-54349) | |
| 2-194, gnl|panTro1|chr10 (13387115-13387724) | |
| 2-194, gnl|rheMac2|chr11 (13078812-13079425) | |
| 2-194, gnl|rn3|chr4 (172095034-172095674) | |
| 206-384, gnl|bosTau2|chr5 (57810843-57810660) | |
| 206-384, gnl|canFam2|chr27 (36622175-36621522) | |
| 206-384, gnl|hg17|chr12 (12769865-12770478) | |
| 206-384, gnl|Hg17|chr12 (12770368-12770549) | |
| 206-384, gnl|loxAfr1|scaffold_24717 (41919-41215) | |
| 206-384, gnl|mm7|chr6 (134943148-134943779) | |
| 206-384, gnl|Mm7|chr6 (134943671-134943845) | |
| 206-384, gnl|monDom2|scaffold_31 (18617975-18617299) | |
| 206-384, gnl|oryCun1|scaffold_203464 (53804-54349) | |
| 206-384, gnl|panTro1|chr10 (13387115-13387724) | |
| 206-384, gnl|rheMac2|chr11 (13078812-13079425) | |
| 206-384, gnl|rn3|chr4 (172095034-172095674) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-194, gnl|bosTau2|chr5 (57811072-57810876) | |
| 2-194, gnl|canFam2|chr27 (36622175-36621522) | |
| 2-194, gnl|hg17|chr12 (12769865-12770478) | |
| 2-194, gnl|Hg17|chr12 (12770170-12770361) | |
| 2-194, gnl|loxAfr1|scaffold_24717 (41919-41215) | |
| 2-194, gnl|mm7|chr6 (134943148-134943779) | |
| 2-194, gnl|Mm7|chr6 (134943458-134943661) | |
| 2-194, gnl|monDom2|scaffold_31 (18617975-18617299) | |
| 2-194, gnl|oryCun1|scaffold_203464 (53804-54349) | |
| 2-194, gnl|panTro1|chr10 (13387115-13387724) | |
| 2-194, gnl|rheMac2|chr11 (13078812-13079425) | |
| 2-194, gnl|rn3|chr4 (172095034-172095674) | |
| 206-384, gnl|bosTau2|chr5 (57810843-57810660) | |
| 206-384, gnl|canFam2|chr27 (36622175-36621522) | |
| 206-384, gnl|hg17|chr12 (12769865-12770478) | |
| 206-384, gnl|Hg17|chr12 (12770368-12770549) | |
| 206-384, gnl|loxAfr1|scaffold_24717 (41919-41215) | |
| 206-384, gnl|mm7|chr6 (134943148-134943779) | |
| 206-384, gnl|Mm7|chr6 (134943671-134943845) | |
| 206-384, gnl|monDom2|scaffold_31 (18617975-18617299) | |
| 206-384, gnl|oryCun1|scaffold_203464 (53804-54349) | |
| 206-384, gnl|panTro1|chr10 (13387115-13387724) | |
| 206-384, gnl|rheMac2|chr11 (13078812-13079425) | |
| 206-384, gnl|rn3|chr4 (172095034-172095674) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| gul (0.177588) |