Non-Coding RNA Search

rgul0126_p21.y1

Sequence:


               
               TGACTTTATTCAAGCCAAGAGGAAGGCAAAGGGCTGTGTCAACTAACTTTCCCTGAACTG
GTGCATCAGCAGAATGGGCTAGCCTCTCTCACTCCACTCCTGATCCCACACGCAGAGTTC
ATGGCTGCCCTGTTCGGAACTCCAGCAGGCAAAGGAGCGGAAAGGCCACTTGGACACCTG
GAACCCTTCAGTCTTGCTCAAGAATGGGAGCTATCACAGTATGTCATCAACTAATAGAAC
GTCACAGCAACCTTTGTCCTCTCGCAGTGTATGATCAGTTGTATGAGCATATTTCTTCAG
CTTTGGAATTCTAAGACCTTGAATTATGTATTAGTACCAAGAAGTCAAAATATTCAGCGA
TGTGTTGTTTGAGGAACTTTTGATTTTCTGTGAGGGAATGACCAATAACCTTAATTTAAA
AATCTCTATGTAGGGACCATTCTTCATGCCTAATGGTTCATTTTTATGACCCTTTTATTA
ACATTCCATCTCACTTTGAGTGAATGTCATTAGGTCATTTGTTGCCAAAACAGAGTATCT
GAGGAGTTCCCATCATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGACTTTATTCAAGCCAAGAGGAAGGCAAAGGGCTGTGTCAACTAACTTTCCCTGAACTG
GTGCATCAGCAGAATGGGCTAGCCTCTCTCACTCCACTCCTGATCCCACACGCAGAGTTC
ATGGCTGCCCTGTTCGGAACTCCAGCAGGCAAAGGAGCGGAAAGGCCACTTGGACACCTG
GAACCCTTCAGTCTTGCTCAAGAATGGGAGCTATCACAGTATGTCATCAACTAATAGAAC
GTCACAGCAACCTTTGTCCTCTCGCAGTGTATGATCAGTTGTATGAGCATATTTCTTCAG
CTTTGGAATTCTAAGACCTTGAATTATGTATTAGTACCAAGAAGTCAAAATATTCAGCGA
TGTGTTGTTTGAGGAACTTTTGATTTTCTGTGAGGGAATGACCAATAACCTTAATTTAAA
AATCTCTATGTAGGGACCATTCTTCATGCCTAATGGTTCATTTTTATGACCCTTTTATTA
ACATTCCATCTCACTTTGAGTGAATGTCATTAGGTCATTTGTTGCCAAAACAGAGTATCT
GAGGAGTTCCCATCATGA

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               1-251, gnl|bosTau2|chr6 (44403750-44404009)
               

               
               1-251, gnl|Hg17|chr4 (55853110-55852852)
               


               
               309-542, gnl|bosTau2|chr6 (44404116-44404362)
               

               
               309-542, gnl|canFam2|chr13 (50436300-50436516)
               

               
               309-542, gnl|dasNov1|scaffold_4215 (1401-1169)
               

               
               309-542, gnl|hg17|chr4 (55852516-55852720)
               

               
               309-542, gnl|Hg17|chr4 (55852770-55852544)
               

               
               309-542, gnl|loxAfr1|scaffold_2090 (25362-25154)
               

               
               309-542, gnl|mm7|chr5 (75415912-75416105)
               

               
               309-542, gnl|Mm7|chr5 (75416155-75415939)
               

               
               309-542, gnl|monDom2|scaffold_26 (18955999-18956181)
               

               
               309-542, gnl|panTro1|chr3 (90792487-90792283)
               

               
               309-542, gnl|rheMac2|chr5 (74253031-74252832)
               

               
               309-542, gnl|rn3|chr14 (34481869-34481676)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-251, gnl|bosTau2|chr6 (44403750-44404009)
               

               
               1-251, gnl|Hg17|chr4 (55853110-55852852)
               


               
               309-542, gnl|bosTau2|chr6 (44404116-44404362)
               

               
               309-542, gnl|canFam2|chr13 (50436300-50436516)
               

               
               309-542, gnl|dasNov1|scaffold_4215 (1401-1169)
               

               
               309-542, gnl|hg17|chr4 (55852516-55852720)
               

               
               309-542, gnl|Hg17|chr4 (55852770-55852544)
               

               
               309-542, gnl|loxAfr1|scaffold_2090 (25362-25154)
               

               
               309-542, gnl|mm7|chr5 (75415912-75416105)
               

               
               309-542, gnl|Mm7|chr5 (75416155-75415939)
               

               
               309-542, gnl|monDom2|scaffold_26 (18955999-18956181)
               

               
               309-542, gnl|panTro1|chr3 (90792487-90792283)
               

               
               309-542, gnl|rheMac2|chr5 (74253031-74252832)
               

               
               309-542, gnl|rn3|chr14 (34481869-34481676)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               gul (0.177588)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)

	1-251, gnl\|bosTau2\|chr6 (44403750-44404009)
	1-251, gnl\|Hg17\|chr4 (55853110-55852852)

	309-542, gnl\|bosTau2\|chr6 (44404116-44404362)
	309-542, gnl\|canFam2\|chr13 (50436300-50436516)
	309-542, gnl\|dasNov1\|scaffold_4215 (1401-1169)
	309-542, gnl\|hg17\|chr4 (55852516-55852720)
	309-542, gnl\|Hg17\|chr4 (55852770-55852544)
	309-542, gnl\|loxAfr1\|scaffold_2090 (25362-25154)
	309-542, gnl\|mm7\|chr5 (75415912-75416105)
	309-542, gnl\|Mm7\|chr5 (75416155-75415939)
	309-542, gnl\|monDom2\|scaffold_26 (18955999-18956181)
	309-542, gnl\|panTro1\|chr3 (90792487-90792283)
	309-542, gnl\|rheMac2\|chr5 (74253031-74252832)
	309-542, gnl\|rn3\|chr14 (34481869-34481676)