Non-Coding RNA Search

rhlv20b_o7.y1

Sequence:


               
               GAAATTGCCACCTACGGCATGTCACCTTACCCAGGAATTGACCTGTCCCAGGTGTATGAG
CTGCTAGAGAAAGACTACCGCATGGAGCGCCCGGAAGGCTGCCCGGAGAAGGTCTACGAA
CTCATGCGAGCATGTGAGCCTCCCTTTGGGAAGGGAAGCGTGGGACTTCCCCAGGTCGGG
GGGCGTTGAGGAGACCCGGGGCAGGGCGAGGCCAAAGTGCTCGCTTGCTTCCTCTCCTCC
TTCCCTCCTTCAGAAACAACTCGTGTGACAGTTTGGCGCATAGCATTGTACCTTTTCCAG
TGTGTCTGTGCACCTTTAGTTTTACATAGTATTTATATGTGAGGGTCTTTTGTTTGTTCT
TAATGCAAAAGTGACATGGATGGATACCAAACCTGGGTTTCTTATTAATAAATATAAATT
TCTGGTATAGTAGGTAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAATTGCCACCTACGGCATGTCACCTTACCCAGGAATTGACCTGTCCCAGGTGTATGAG
CTGCTAGAGAAAGACTACCGCATGGAGCGCCCGGAAGGCTGCCCGGAGAAGGTCTACGAA
CTCATGCGAGCATGTGAGCCTCCCTTTGGGAAGGGAAGCGTGGGACTTCCCCAGGTCGGG
GGGCGTTGAGGAGACCCGGGGCAGGGCGAGGCCAAAGTGCTCGCTTGCTTCCTCTCCTCC
TTCCCTCCTTCAGAAACAACTCGTGTGACAGTTTGGCGCATAGCATTGTACCTTTTCCAG
TGTGTCTGTGCACCTTTAGTTTTACATAGTATTTATATGTGAGGGTCTTTTGTTTGTTCT
TAATGCAAAAGTGACATGGATGGATACCAAACCTGGGTTTCTTATTAATAAATATAAATT
TCTGGTATAGTAGGTAAAAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               80-194, - strand, RNAz p=0.9919

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-194, - strand, RNAz p=0.9919

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-398, gnl|bosTau2|chr11 (84635346-84635742)
               

               
               1-398, gnl|Hg17|chr9 (130783376-130783742)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-398, gnl|bosTau2|chr11 (84635346-84635742)
               

               
               1-398, gnl|Hg17|chr9 (130783376-130783742)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               hlv (0.139256)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hlv (0.139256)

	1-398, gnl\|bosTau2\|chr11 (84635346-84635742)
	1-398, gnl\|Hg17\|chr9 (130783376-130783742)