Non-Coding RNA Search

rhlv40b_g1.y1

Sequence:


               
               GTGGCAGTTCCTCGGATCTTTAAACTAGAAGTATCATGTGGCCGACAAGTCCCCTTCTGA
GTGCTTACCGAGTTGAGTGATATGCTTGGCCAAGGGGTAGGATTTAATGGTAAATATATA
TACTTCTCCTATCGTACCACACTCACGTGATAAGTGAATTTAAGGACAATGCTTGGTTTA
GTGGTCAGTGCACTGATAACTACATTTTTCTGGAATTTTGGATTTAGCCTCATCAGCACA
TTTTATTGTTGATTCCTTCTTTTCTTGACCCGTAGAATTTCCTTGGAAAGCTGAGTTCCG
TCCTACAAAGAATGTTCTACGGCACTTAGGAAAAAGTTGTAATAGGAAGATGGCGGGATT
AAATAAGTTTGATAAATGGATTTAGCTGTTTATAATAATCTGCTTGGTATAGCCCTCTCT
TTATACCTAGCAACTGTTGTTTCTACAATATAATGATTTTCTCTGTATAAAGTAAAAGGA
TAAAATTTAATACTTATCATCCTTATATTTCAAACTTGTCACTTAGAGACTTGAAGCTGC
ATATTTTGGACCAGAAACAAAGATGAGGTCCATTTTTAAAATCTGTGCTAAATCAGTTTT
TAAAATATTGACCAAGAAAAGGTTTATTATTATTTCAGTTTTTAAAGTGATTTCCATCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGCAGTTCCTCGGATCTTTAAACTAGAAGTATCATGTGGCCGACAAGTCCCCTTCTGA
GTGCTTACCGAGTTGAGTGATATGCTTGGCCAAGGGGTAGGATTTAATGGTAAATATATA
TACTTCTCCTATCGTACCACACTCACGTGATAAGTGAATTTAAGGACAATGCTTGGTTTA
GTGGTCAGTGCACTGATAACTACATTTTTCTGGAATTTTGGATTTAGCCTCATCAGCACA
TTTTATTGTTGATTCCTTCTTTTCTTGACCCGTAGAATTTCCTTGGAAAGCTGAGTTCCG
TCCTACAAAGAATGTTCTACGGCACTTAGGAAAAAGTTGTAATAGGAAGATGGCGGGATT
AAATAAGTTTGATAAATGGATTTAGCTGTTTATAATAATCTGCTTGGTATAGCCCTCTCT
TTATACCTAGCAACTGTTGTTTCTACAATATAATGATTTTCTCTGTATAAAGTAAAAGGA
TAAAATTTAATACTTATCATCCTTATATTTCAAACTTGTCACTTAGAGACTTGAAGCTGC
ATATTTTGGACCAGAAACAAAGATGAGGTCCATTTTTAAAATCTGTGCTAAATCAGTTTT
TAAAATATTGACCAAGAAAAGGTTTATTATTATTTCAGTTTTTAAAGTGATTTCCATCCA

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               148-633, gnl|bosTau2|chr3 (84316296-84316778)
               

               
               148-633, gnl|canFam2|chr25 (51441651-51442100)
               

               
               148-633, gnl|dasNov1|scaffold_51829 (9696-10213)
               

               
               148-633, gnl|hg17|chr2 (238532446-238532908)
               

               
               148-633, gnl|mm7|chr1 (91077498-91077922)
               

               
               148-633, gnl|Mm7|chr1 (91077412-91077838)
               

               
               148-633, gnl|oryCun1|scaffold_125906 (5525-5951)
               

               
               148-633, gnl|panTro1|chr13 (129477010-129477470)
               

               
               148-633, gnl|rheMac2|chr12 (101701459-101701913)
               

               
               148-633, gnl|rn3|chr9 (90597603-90598004)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               148-633, gnl|bosTau2|chr3 (84316296-84316778)
               

               
               148-633, gnl|canFam2|chr25 (51441651-51442100)
               

               
               148-633, gnl|dasNov1|scaffold_51829 (9696-10213)
               

               
               148-633, gnl|hg17|chr2 (238532446-238532908)
               

               
               148-633, gnl|mm7|chr1 (91077498-91077922)
               

               
               148-633, gnl|Mm7|chr1 (91077412-91077838)
               

               
               148-633, gnl|oryCun1|scaffold_125906 (5525-5951)
               

               
               148-633, gnl|panTro1|chr13 (129477010-129477470)
               

               
               148-633, gnl|rheMac2|chr12 (101701459-101701913)
               

               
               148-633, gnl|rn3|chr9 (90597603-90598004)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               hlv (0.139256)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hlv (0.139256)

	148-633, gnl\|bosTau2\|chr3 (84316296-84316778)
	148-633, gnl\|canFam2\|chr25 (51441651-51442100)
	148-633, gnl\|dasNov1\|scaffold_51829 (9696-10213)
	148-633, gnl\|hg17\|chr2 (238532446-238532908)
	148-633, gnl\|mm7\|chr1 (91077498-91077922)
	148-633, gnl\|Mm7\|chr1 (91077412-91077838)
	148-633, gnl\|oryCun1\|scaffold_125906 (5525-5951)
	148-633, gnl\|panTro1\|chr13 (129477010-129477470)
	148-633, gnl\|rheMac2\|chr12 (101701459-101701913)
	148-633, gnl\|rn3\|chr9 (90597603-90598004)