rhyp02c_j15.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAATTTCAGTCACCATTGCCTATTCAGATCCCCTCTTCACAGGCCACCCGGGGACCTCA GCCTGGACGGTGCTTAATTCAAACTAAAGGGCAAAGGAGTATGGATGGATATCCAGAGCA GTTTTGTGTGAGAATAGAGAAGAATCCTGGCCTTGGATTTAGTATCAGTGGTGGAATTAG CGGACAAGGAAATCCTTTTAAGCCTTCTGACAAGGGTTCAGCCTGATGGACCAGCATCCA ACCTGCTGCAGCCTGGTGATAAAATCCTTCAGGCAAACGGACATAGTTTGGTACATATGG AACATGAAAAAGCTGTATTACTACTGAAGAGTTTCCAGAACACAGTAGACCTAGTTATTC AACGTGAGCTTACTGTCTAAATATTTTTTATAAATAGTGAAGATACGTCTAGCCAGACCT AATGTTCAAAAATAAATTTATACATAGAAACAAACTTGGCCAATTGCTGGACCAATGGCA AACATTAGTGCCAAATGTATAATACTACATGTTAGCATTGATCATCCTTAAAAATGTTAA CTATATAAATATGATGTTCATGTGGTTATGTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAATTTCAGTCACCATTGCCTATTCAGATCCCCTCTTCACAGGCCACCCGGGGACCTCA GCCTGGACGGTGCTTAATTCAAACTAAAGGGCAAAGGAGTATGGATGGATATCCAGAGCA GTTTTGTGTGAGAATAGAGAAGAATCCTGGCCTTGGATTTAGTATCAGTGGTGGAATTAG CGGACAAGGAAATCCTTTTAAGCCTTCTGACAAGGGTTCAGCCTGATGGACCAGCATCCA ACCTGCTGCAGCCTGGTGATAAAATCCTTCAGGCAAACGGACATAGTTTGGTACATATGG AACATGAAAAAGCTGTATTACTACTGAAGAGTTTCCAGAACACAGTAGACCTAGTTATTC AACGTGAGCTTACTGTCTAAATATTTTTTATAAATAGTGAAGATACGTCTAGCCAGACCT AATGTTCAAAAATAAATTTATACATAGAAACAAACTTGGCCAATTGCTGGACCAATGGCA AACATTAGTGCCAAATGTATAATACTACATGTTAGCATTGATCATCCTTAAAAATGTTAA CTATATAAATATGATGTTCATGTGGTTATGTA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 389-546, - strand, RNAz p=0.994447 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 389-546, - strand, RNAz p=0.994447 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 1-121, gnl|bosTau2|chr3 (51113047-51113167) | |
| 1-121, gnl|Hg17|chr1 (70253882-70254002) | |
| 1-121, gnl|Mm7|chr3 (158043474-158043354) | |
| 270-572, gnl|bosTau2|chr3 (50569956-50569655) | |
| 270-572, gnl|Hg17|chr1 (70299481-70299784) | |
| 270-572, gnl|Mm7|chr3 (157992715-157992415) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-121, gnl|bosTau2|chr3 (51113047-51113167) | |
| 1-121, gnl|Hg17|chr1 (70253882-70254002) | |
| 1-121, gnl|Mm7|chr3 (158043474-158043354) | |
| 270-572, gnl|bosTau2|chr3 (50569956-50569655) | |
| 270-572, gnl|Hg17|chr1 (70299481-70299784) | |
| 270-572, gnl|Mm7|chr3 (157992715-157992415) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) |