Non-Coding RNA Search

rhyp05c_m11.y1

Sequence:


               
               TGGGCATCGTCCCACTTGCGATGGACACAGAGGTTCTGAACACGGCTATTCTCACCGGAA
AGGCTGTTTCGGTCCCGGTCAAGGTCGTGGCGGTTCAAGAGGATGGTTCCGTGGTGGACG
TGTCGGAGGCTGTGGAATGCAGGTCTGCGGATGAAGACGTCGTCAAGGTTTCCGATGGCT
GCGATTCCATTTTTGTGAACGGAAAGGAGATGAAGAGCAAAGTGGACACGATCGTGAACT
TCACCCACCAGCACTTCACCTCCCAGTTAGAGGTCACGGTCTGGGCGCCCAGACTCCCAC
TGCAGGTGGAGATCTCGGACACAGAGCTGAGCCAGGTCAAAGGATGGAGGATCCCGGTGG
CCTCCAACCGAAGTGTCCTGCTGTAAATATCAGTCATCATCTATGGAGCACAGTGCGATA
GCTAAGTTGTGGGCTCTGGAATAAGGCCACTGAGTTTTCACCCTGACTTTCCTCCATAGA
GCTGTGCGACCTCGGACAAGTTATGTAATCTCTCTGTTCGTTTCTTCATCTATAAATGGG
AGATGACACTAGAGTTACGGAATAGAGTTTTCCCAATAATTCAATGAAATGATACATCCT
GCAGTAGACAGAATTCTAAAGATGACATCCCTCAAGATTCCTGTCTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGCATCGTCCCACTTGCGATGGACACAGAGGTTCTGAACACGGCTATTCTCACCGGAA
AGGCTGTTTCGGTCCCGGTCAAGGTCGTGGCGGTTCAAGAGGATGGTTCCGTGGTGGACG
TGTCGGAGGCTGTGGAATGCAGGTCTGCGGATGAAGACGTCGTCAAGGTTTCCGATGGCT
GCGATTCCATTTTTGTGAACGGAAAGGAGATGAAGAGCAAAGTGGACACGATCGTGAACT
TCACCCACCAGCACTTCACCTCCCAGTTAGAGGTCACGGTCTGGGCGCCCAGACTCCCAC
TGCAGGTGGAGATCTCGGACACAGAGCTGAGCCAGGTCAAAGGATGGAGGATCCCGGTGG
CCTCCAACCGAAGTGTCCTGCTGTAAATATCAGTCATCATCTATGGAGCACAGTGCGATA
GCTAAGTTGTGGGCTCTGGAATAAGGCCACTGAGTTTTCACCCTGACTTTCCTCCATAGA
GCTGTGCGACCTCGGACAAGTTATGTAATCTCTCTGTTCGTTTCTTCATCTATAAATGGG
AGATGACACTAGAGTTACGGAATAGAGTTTTCCCAATAATTCAATGAAATGATACATCCT
GCAGTAGACAGAATTCTAAAGATGACATCCCTCAAGATTCCTGTCTGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-169, gnl|bosTau2|chr17 (25635849-25636011)
               

               
               7-169, gnl|Hg17|chr12 (126353842-126353680)
               

               
               7-169, gnl|Mm7|chr5 (124988712-124988874)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-169, gnl|bosTau2|chr17 (25635849-25636011)
               

               
               7-169, gnl|Hg17|chr12 (126353842-126353680)
               

               
               7-169, gnl|Mm7|chr5 (124988712-124988874)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hyp (0.142837)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)

	7-169, gnl\|bosTau2\|chr17 (25635849-25636011)
	7-169, gnl\|Hg17\|chr12 (126353842-126353680)
	7-169, gnl\|Mm7\|chr5 (124988712-124988874)