Non-Coding RNA Search

rhyp06c_n11.y1

Sequence:


               
               GCCGCTGCTAGCAGAGGCCTACTTCTGGCATGGACCCTCCAGACCATGGGACCCCAAACA
CTAGCCCCGGCGGGGCTTGACCAAACTGAAGAAGACATCAAGACCAAAATCAAGAACTAT
CAGATTTCTCCCTTTGACAGCCGCTTCCCCAGTGAGAACTGCTGGCAGAACTACCTGGAC
CTCCACCGCTGTGAGAAGGCAATGACTGCTAAAGGGGGTGAAGACTCTGTGTGTGTGCAA
GTCCCTCTGCCCCATTTCCTGCCTGGAGGACTGTCAGGCAAAAGGCATGTTTCCTGGGAA
GATCTGAGCTGGCTCCCCCTCACCTCCTCTGTCCTCCATCTTTCTCCCCATGGTGGTGAA
GGGGGACCTGGGTACATGGTGATTCCCACCCTGGGATCCCGAATCATGGCTTGACTACTA
ATAAATACTTGTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGCTGCTAGCAGAGGCCTACTTCTGGCATGGACCCTCCAGACCATGGGACCCCAAACA
CTAGCCCCGGCGGGGCTTGACCAAACTGAAGAAGACATCAAGACCAAAATCAAGAACTAT
CAGATTTCTCCCTTTGACAGCCGCTTCCCCAGTGAGAACTGCTGGCAGAACTACCTGGAC
CTCCACCGCTGTGAGAAGGCAATGACTGCTAAAGGGGGTGAAGACTCTGTGTGTGTGCAA
GTCCCTCTGCCCCATTTCCTGCCTGGAGGACTGTCAGGCAAAAGGCATGTTTCCTGGGAA
GATCTGAGCTGGCTCCCCCTCACCTCCTCTGTCCTCCATCTTTCTCCCCATGGTGGTGAA
GGGGGACCTGGGTACATGGTGATTCCCACCCTGGGATCCCGAATCATGGCTTGACTACTA
ATAAATACTTGTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|33285265|gb|AAP43950.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|33285265|gb|AAP43950.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               90-460, gnl|bosTau2|chr18 (42542822-42543230)
               

               
               90-460, gnl|Hg17|chr8 (26749662-26749268)
               

               
               90-460, gnl|Mm7|chr4 (108310254-108309887)
               


               
               120-452, gnl|bosTau2|chr10 (34431054-34430702)
               

               
               120-452, gnl|Hg17|chr17 (44146123-44146464)
               

               
               120-452, gnl|Mm7|chr3 (71569640-71569082)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               90-460, gnl|bosTau2|chr18 (42542822-42543230)
               

               
               90-460, gnl|Hg17|chr8 (26749662-26749268)
               

               
               90-460, gnl|Mm7|chr4 (108310254-108309887)
               


               
               120-452, gnl|bosTau2|chr10 (34431054-34430702)
               

               
               120-452, gnl|Hg17|chr17 (44146123-44146464)
               

               
               120-452, gnl|Mm7|chr3 (71569640-71569082)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hyp (0.142837)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)

	90-460, gnl\|bosTau2\|chr18 (42542822-42543230)
	90-460, gnl\|Hg17\|chr8 (26749662-26749268)
	90-460, gnl\|Mm7\|chr4 (108310254-108309887)

	120-452, gnl\|bosTau2\|chr10 (34431054-34430702)
	120-452, gnl\|Hg17\|chr17 (44146123-44146464)
	120-452, gnl\|Mm7\|chr3 (71569640-71569082)