Non-Coding RNA Search

rhyp09c_k9.y1

Sequence:


               
               AAGGAATTCACCTTCAGGCACAAAGAGCATTCCTTAGAATGAAACTGCCCTTTCCCTAAG
GAGATGGCTCCATTTCTCCGCTTGCCACCAGCACTGGGGTCTTGGCTTGTGTTTTCCTTC
TGGTTGAGCTGGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGGAATTCACCTTCAGGCACAAAGAGCATTCCTTAGAATGAAACTGCCCTTTCCCTAAG
GAGATGGCTCCATTTCTCCGCTTGCCACCAGCACTGGGGTCTTGGCTTGTGTTTTCCTTC
TGGTTGAGCTGGGC

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               3-129, gnl|bosTau2|chr2 (81547598-81547472)
               

               
               3-129, gnl|canFam2|chr10 (35661249-35660935)
               

               
               3-129, gnl|dasNov1|scaffold_9463 (26837-26522)
               

               
               3-129, gnl|echTel1|scaffold_303596 (540-840)
               

               
               3-129, gnl|hg17|chr12 (104961023-104961361)
               

               
               3-129, gnl|Hg17|chr12 (104961293-104961167)
               

               
               3-129, gnl|loxAfr1|scaffold_3321 (44097-44396)
               

               
               3-129, gnl|mm7|chr10 (83913898-83914152)
               

               
               3-129, gnl|oryCun1|scaffold_84351 (13609-13300)
               

               
               3-129, gnl|panTro1|chr10 (107473270-107473611)
               

               
               3-129, gnl|rheMac2|chr11 (107152526-107152874)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-129, gnl|bosTau2|chr2 (81547598-81547472)
               

               
               3-129, gnl|canFam2|chr10 (35661249-35660935)
               

               
               3-129, gnl|dasNov1|scaffold_9463 (26837-26522)
               

               
               3-129, gnl|echTel1|scaffold_303596 (540-840)
               

               
               3-129, gnl|hg17|chr12 (104961023-104961361)
               

               
               3-129, gnl|Hg17|chr12 (104961293-104961167)
               

               
               3-129, gnl|loxAfr1|scaffold_3321 (44097-44396)
               

               
               3-129, gnl|mm7|chr10 (83913898-83914152)
               

               
               3-129, gnl|oryCun1|scaffold_84351 (13609-13300)
               

               
               3-129, gnl|panTro1|chr10 (107473270-107473611)
               

               
               3-129, gnl|rheMac2|chr11 (107152526-107152874)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               hyp (0.142837)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)

	3-129, gnl\|bosTau2\|chr2 (81547598-81547472)
	3-129, gnl\|canFam2\|chr10 (35661249-35660935)
	3-129, gnl\|dasNov1\|scaffold_9463 (26837-26522)
	3-129, gnl\|echTel1\|scaffold_303596 (540-840)
	3-129, gnl\|hg17\|chr12 (104961023-104961361)
	3-129, gnl\|Hg17\|chr12 (104961293-104961167)
	3-129, gnl\|loxAfr1\|scaffold_3321 (44097-44396)
	3-129, gnl\|mm7\|chr10 (83913898-83914152)
	3-129, gnl\|oryCun1\|scaffold_84351 (13609-13300)
	3-129, gnl\|panTro1\|chr10 (107473270-107473611)
	3-129, gnl\|rheMac2\|chr11 (107152526-107152874)