Non-Coding RNA Search

rhyp15c_n11.y1

Sequence:


               
               TCAGTCCCGTTCCGGTTCCCGGGGCTGGCCTGGGGGACTGGGGGTCTGGCCCGCGTCTGA
CCGCCGCTTGGACCCTTGTCCCGCCCGCAGAACTGCGCTCGCTGGCGCACACCCTGCTGG
AACTGCTGCGAGGCGCCCAGGAACTGTTCGGCCCGCGCCCGGGGGTGCGGCGCCTGGCCC
CGGCCCTGACTCGCCCAGCTCCGCGGCTCCGGGATCCGCCCAGGCGCCCTTCTCACGAGC
AGCGGCTGCACCCAGGATCGTGGGCTGCGGGCACGAGGTTTCCGAAGCGGAGGTCGGAGC
CGCGCGCAGAAGCAAACGGCTGCCCTGGGTTGGAGCCCCTGCGGCAGAAGCTGGCCACCC
TCCAGGGCACCCACGCCTGGATTCTGCAGGTCCCCTCAGAGCGCCTGGCCATGGACTTTC
ATGAGGTGCTGGCAGATCTGGGCTCCAAGACACTGACCGGGCTCTTCCGAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGTCCCGTTCCGGTTCCCGGGGCTGGCCTGGGGGACTGGGGGTCTGGCCCGCGTCTGA
CCGCCGCTTGGACCCTTGTCCCGCCCGCAGAACTGCGCTCGCTGGCGCACACCCTGCTGG
AACTGCTGCGAGGCGCCCAGGAACTGTTCGGCCCGCGCCCGGGGGTGCGGCGCCTGGCCC
CGGCCCTGACTCGCCCAGCTCCGCGGCTCCGGGATCCGCCCAGGCGCCCTTCTCACGAGC
AGCGGCTGCACCCAGGATCGTGGGCTGCGGGCACGAGGTTTCCGAAGCGGAGGTCGGAGC
CGCGCGCAGAAGCAAACGGCTGCCCTGGGTTGGAGCCCCTGCGGCAGAAGCTGGCCACCC
TCCAGGGCACCCACGCCTGGATTCTGCAGGTCCCCTCAGAGCGCCTGGCCATGGACTTTC
ATGAGGTGCTGGCAGATCTGGGCTCCAAGACACTGACCGGGCTCTTCCGAGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61845587|ref|XP_603682.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61845587|ref|XP_603682.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               11-256, gnl|bosTau2|chr2 (71934281-71934528)
               

               
               11-256, gnl|Hg17|chr2 (233214166-233214419)
               

               
               11-256, gnl|Mm7|chr1 (87087436-87087725)
               


               
               320-428, gnl|bosTau2|chr2 (71935042-71935150)
               

               
               320-428, gnl|Hg17|chr2 (233214954-233215062)
               

               
               320-428, gnl|Mm7|chr1 (87088173-87088281)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-256, gnl|bosTau2|chr2 (71934281-71934528)
               

               
               11-256, gnl|Hg17|chr2 (233214166-233214419)
               

               
               11-256, gnl|Mm7|chr1 (87087436-87087725)
               


               
               320-428, gnl|bosTau2|chr2 (71935042-71935150)
               

               
               320-428, gnl|Hg17|chr2 (233214954-233215062)
               

               
               320-428, gnl|Mm7|chr1 (87088173-87088281)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hyp (0.142837)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)

	11-256, gnl\|bosTau2\|chr2 (71934281-71934528)
	11-256, gnl\|Hg17\|chr2 (233214166-233214419)
	11-256, gnl\|Mm7\|chr1 (87087436-87087725)

	320-428, gnl\|bosTau2\|chr2 (71935042-71935150)
	320-428, gnl\|Hg17\|chr2 (233214954-233215062)
	320-428, gnl\|Mm7\|chr1 (87088173-87088281)