rhyp16c_m17.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGAGCCCTCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCATGCATT GAGCCTTGCACCTCAATGAAAGGCTCCCTGGATGGTTGTGAAGCAAAACCAGGAGCCCTG GCCGAGGCAAGCAGCCAGTACTTGCCCACTGACAGTCAGTACCTGTCCCCCAGCAAGCAG CAGAGAGACCCTCCCTTCCTGGCTTCGGAGCAGATGGCAAGGGTCTTTGCAGATGTGCAT TCAAGAGCCAGCCGGGATTCCAGTGAGATGGGCGCTGTCCTGGAGCAGCTTGACCACCCC AGCAGGGATCTGGGCAGAGAGTCGGTGGATGCAGAGGAAGTCGTGAGAGAAATTGATAAG CTTCTGCAGGACTGCCGGGGAAATGACCCTGTGGCTGTGAGAAAGTGAAGAAAAAAAAAA AAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGAGCCCTCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCATGCATT GAGCCTTGCACCTCAATGAAAGGCTCCCTGGATGGTTGTGAAGCAAAACCAGGAGCCCTG GCCGAGGCAAGCAGCCAGTACTTGCCCACTGACAGTCAGTACCTGTCCCCCAGCAAGCAG CAGAGAGACCCTCCCTTCCTGGCTTCGGAGCAGATGGCAAGGGTCTTTGCAGATGTGCAT TCAAGAGCCAGCCGGGATTCCAGTGAGATGGGCGCTGTCCTGGAGCAGCTTGACCACCCC AGCAGGGATCTGGGCAGAGAGTCGGTGGATGCAGAGGAAGTCGTGAGAGAAATTGATAAG CTTCTGCAGGACTGCCGGGGAAATGACCCTGTGGCTGTGAGAAAGTGAAGAAAAAAAAAA AAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 1-199, - strand, RNAz p=0.983179 | |
| 305-421, + strand, RNAz p=0.966507 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-199, - strand, RNAz p=0.983179 | |
| 305-421, + strand, RNAz p=0.966507 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of BC028165, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-421, gnl|bosTau2|chr12 (888420-888840) | |
| 1-421, gnl|Hg17|chr13 (57197022-57197446) | |
| 1-421, gnl|Mm7|chr14 (79209505-79209921) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-421, gnl|bosTau2|chr12 (888420-888840) | |
| 1-421, gnl|Hg17|chr13 (57197022-57197446) | |
| 1-421, gnl|Mm7|chr14 (79209505-79209921) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) |