Non-Coding RNA Search

rhyp16c_n12.y1

Sequence:


               
               GGCGCTGCCCCGAGGCCACCTAGGCCACTGAGCACCGATGGCGGTCTGGACCCCTGTCTC
GCCCACCAGGATCTTGGCTAGGGCTGCCTCCAGGTCCCGCCCCATCAGGGCCCTTTCTCC
CGAGAGGGCCTGTCCCACGCCACGCTACTTGGCGCATCCCCCTGTCTGAGCCCACCTCCG
TAGGGTAGACGGAACCCCACCTTGGGGGAGAGTGCTGATAGGCCTGATCGAGCCCCGGGC
CACCCACTCCTCCGTCCGAGGCTTTGGCCAGAGGTCCGAGGCTCTTGCAGAACTGTCCAC
CCTGCCTTTTAATGGGGAGTGAGGACCACACCTGTCTTTTGCAAGTGGATGAGCCCAGGC
CACGGAAAAGGGCTGAGCCCTGGGAAAGGCTGCTCTTCCTGCCAGGGGTCAGAGGCCCCC
ACACCGTCTGTCTTCCAGGTTCCACTCTCCCCACAGACCTAAGCTGCTCCCAGACTCCCA
GAACCAAGAGTTCTTGAGTTGGGCTTTTGGTTGGTGGGTTTTTCTTTTGGTAATAAAATA
TTTTAAAACGTGAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGCTGCCCCGAGGCCACCTAGGCCACTGAGCACCGATGGCGGTCTGGACCCCTGTCTC
GCCCACCAGGATCTTGGCTAGGGCTGCCTCCAGGTCCCGCCCCATCAGGGCCCTTTCTCC
CGAGAGGGCCTGTCCCACGCCACGCTACTTGGCGCATCCCCCTGTCTGAGCCCACCTCCG
TAGGGTAGACGGAACCCCACCTTGGGGGAGAGTGCTGATAGGCCTGATCGAGCCCCGGGC
CACCCACTCCTCCGTCCGAGGCTTTGGCCAGAGGTCCGAGGCTCTTGCAGAACTGTCCAC
CCTGCCTTTTAATGGGGAGTGAGGACCACACCTGTCTTTTGCAAGTGGATGAGCCCAGGC
CACGGAAAAGGGCTGAGCCCTGGGAAAGGCTGCTCTTCCTGCCAGGGGTCAGAGGCCCCC
ACACCGTCTGTCTTCCAGGTTCCACTCTCCCCACAGACCTAAGCTGCTCCCAGACTCCCA
GAACCAAGAGTTCTTGAGTTGGGCTTTTGGTTGGTGGGTTTTTCTTTTGGTAATAAAATA
TTTTAAAACGTGAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               391-552, gnl|bosTau2|chr29 (38865982-38865822)
               

               
               391-552, gnl|Hg17|chr11 (65566164-65565999)
               

               
               391-552, gnl|Mm7|chr19 (5203068-5203547)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               391-552, gnl|bosTau2|chr29 (38865982-38865822)
               

               
               391-552, gnl|Hg17|chr11 (65566164-65565999)
               

               
               391-552, gnl|Mm7|chr19 (5203068-5203547)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hyp (0.142837)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)

	391-552, gnl\|bosTau2\|chr29 (38865982-38865822)
	391-552, gnl\|Hg17\|chr11 (65566164-65565999)
	391-552, gnl\|Mm7\|chr19 (5203068-5203547)