Non-Coding RNA Search

rhyp22c_b20.y1

Sequence:


               
               AATGCTAGCTAAACTCACACTTTTTTCAGAACGTGTGAATGGGACTCTCTGACTTGTTTT
CATAGTGGCTATGGATGAAATGTAATGGGTAACATTTCATTCTACTCTGTACCCAATAAG
GGGACAGCTTTGGTGGAGGGATTTTTTCAGAGTCATTTAATGCTTAGGGTTTTCATCTGC
TGTTAAATAAGAAATGAGCTCTGTAGAGAGGCTTTCCTATGTTGTTTTTATTGGTAGTGT
CTCTCTTGCGTTGGGTTCTTTTAAATATTAGCAGGAAAAAAATATCTGAAAGTCTTATTG
CTTTTCATTACGTTTACAGGGTTTATTTCCAGTTTCAGTTCCTATTAGATAAATAAATTG
AATATTCTGGTTGaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATGCTAGCTAAACTCACACTTTTTTCAGAACGTGTGAATGGGACTCTCTGACTTGTTTT
CATAGTGGCTATGGATGAAATGTAATGGGTAACATTTCATTCTACTCTGTACCCAATAAG
GGGACAGCTTTGGTGGAGGGATTTTTTCAGAGTCATTTAATGCTTAGGGTTTTCATCTGC
TGTTAAATAAGAAATGAGCTCTGTAGAGAGGCTTTCCTATGTTGTTTTTATTGGTAGTGT
CTCTCTTGCGTTGGGTTCTTTTAAATATTAGCAGGAAAAAAATATCTGAAAGTCTTATTG
CTTTTCATTACGTTTACAGGGTTTATTTCCAGTTTCAGTTCCTATTAGATAAATAAATTG
AATATTCTGGTTGaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               17-376, gnl|bosTau2|chr1 (8022395-8022747)
               

               
               17-376, gnl|Hg17|chr21 (26053426-26053893)
               

               
               17-376, gnl|Mm7|chr16 (84852267-84852571)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-376, gnl|bosTau2|chr1 (8022395-8022747)
               

               
               17-376, gnl|Hg17|chr21 (26053426-26053893)
               

               
               17-376, gnl|Mm7|chr16 (84852267-84852571)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hyp (0.142837)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)

	17-376, gnl\|bosTau2\|chr1 (8022395-8022747)
	17-376, gnl\|Hg17\|chr21 (26053426-26053893)
	17-376, gnl\|Mm7\|chr16 (84852267-84852571)