rhyp28c_k16.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCAGCCACCCGAATGGCATTTTGACAGAGTACACCTTAAAATATCAGCCAATTAACAGC ACACATGAATTAGGTCCTCTGATAGATTTAAAAATTCCTGCCAACAAGACCCGCTGGACG TTAAAAAATTTAAATTTCAGCACTCGGTATAAGTTTTATTTCTATGCACAAACAGCAGCA GGATCAGGAAGTCAAATAACAGAGGAAGCAGTAACAACTGTGGATGAAGCTGGTATTCTT CCACCTGATGTAGGTGCAGGCAAAGCAATGGCAAGCCGGCAGGTGGATATAGCAACTCAG GGCTGGTTCATTGGTCTAATGTGTGCTGTTGCTCTCCTGATCTTAATTTTGCTGATCGTT TGCTTCATCAGAAGAAACAAAGGTGGTAAATATCCAGTTAAAGAAAAGGAAGATGCCCAT GCAGATCCTGAAATCCAGCCTATGAAGGAAGATGATGGCACTTTTGGAGAATACAGTGAT GCAGAAGACCACAAGCCTTTAAAAAAAGGCAGTCGAACCCCTTCGGACAGGACTGTGAAA AAAGAAGACAGCGATGATAGCCTGGTTGACTATGGAGAAGGGGTGAATGGCCAGTTCAAT GAGGACG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCAGCCACCCGAATGGCATTTTGACAGAGTACACCTTAAAATATCAGCCAATTAACAGC ACACATGAATTAGGTCCTCTGATAGATTTAAAAATTCCTGCCAACAAGACCCGCTGGACG TTAAAAAATTTAAATTTCAGCACTCGGTATAAGTTTTATTTCTATGCACAAACAGCAGCA GGATCAGGAAGTCAAATAACAGAGGAAGCAGTAACAACTGTGGATGAAGCTGGTATTCTT CCACCTGATGTAGGTGCAGGCAAAGCAATGGCAAGCCGGCAGGTGGATATAGCAACTCAG GGCTGGTTCATTGGTCTAATGTGTGCTGTTGCTCTCCTGATCTTAATTTTGCTGATCGTT TGCTTCATCAGAAGAAACAAAGGTGGTAAATATCCAGTTAAAGAAAAGGAAGATGCCCAT GCAGATCCTGAAATCCAGCCTATGAAGGAAGATGATGGCACTTTTGGAGAATACAGTGAT GCAGAAGACCACAAGCCTTTAAAAAAAGGCAGTCGAACCCCTTCGGACAGGACTGTGAAA AAAGAAGACAGCGATGATAGCCTGGTTGACTATGGAGAAGGGGTGAATGGCCAGTTCAAT GAGGACG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 50-229, gnl|bosTau2|chr4 (19303890-19303711) | |
| 50-229, gnl|canFam2|chr18 (15435666-15435448) | |
| 50-229, gnl|dasNov1|scaffold_538 (67569-67351) | |
| 50-229, gnl|echTel1|scaffold_313510 (83105-82888) | |
| 50-229, gnl|fr1|chrUn (119382913-119382697) | |
| 50-229, gnl|galGal2|chr1 (25612063-25611857) | |
| 50-229, gnl|hg17|chr7 (107410806-107411024) | |
| 50-229, gnl|Hg17|chr7 (107411005-107410826) | |
| 50-229, gnl|loxAfr1|scaffold_10879 (36619-36837) | |
| 50-229, gnl|mm7|chr12 (42544795-42544577) | |
| 50-229, gnl|Mm7|chr12 (42544594-42544773) | |
| 50-229, gnl|monDom2|scaffold_22 (44301832-44301615) | |
| 50-229, gnl|panTro1|chr6 (109327311-109327529) | |
| 50-229, gnl|rheMac2|chr3 (145602520-145602738) | |
| 50-229, gnl|rn3|chr6 (63992308-63992090) | |
| 50-229, gnl|tetNig1|chr19 (4121892-4122075) | |
| 50-229, gnl|xenTro1|scaffold_66 (745905-745686) | |
| 264-406, gnl|bosTau2|chr4 (19289747-19289606) | |
| 264-406, gnl|Hg17|chr7 (107394890-107394749) | |
| 264-406, gnl|Mm7|chr12 (42558099-42558239) | |
| 474-607, gnl|bosTau2|chr4 (19277913-19277780) | |
| 474-607, gnl|canFam2|chr18 (15460988-15460725) | |
| 474-607, gnl|danRer3|chr4 (11435537-11435795) | |
| 474-607, gnl|dasNov1|scaffold_538 (84182-83918) | |
| 474-607, gnl|echTel1|scaffold_313510 (121004-120739) | |
| 474-607, gnl|fr1|chrUn (119386584-119386329) | |
| 474-607, gnl|galGal2|chr1 (25638543-25638280) | |
| 474-607, gnl|hg17|chr7 (107384300-107384563) | |
| 474-607, gnl|Hg17|chr7 (107384546-107384413) | |
| 474-607, gnl|loxAfr1|scaffold_10879 (9480-9744) | |
| 474-607, gnl|mm7|chr12 (42566589-42566323) | |
| 474-607, gnl|Mm7|chr12 (42566340-42566473) | |
| 474-607, gnl|monDom2|scaffold_22 (44331099-44330826) | |
| 474-607, gnl|oryCun1|scaffold_197633 (981-706) | |
| 474-607, gnl|panTro1|chr6 (109300646-109300909) | |
| 474-607, gnl|rheMac2|chr3 (145576188-145576451) | |
| 474-607, gnl|rn3|chr6 (64015494-64015231) | |
| 474-607, gnl|tetNig1|chr19 (4118335-4118575) | |
| 474-607, gnl|xenTro1|scaffold_66 (763463-763203) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 50-229, gnl|bosTau2|chr4 (19303890-19303711) | |
| 50-229, gnl|canFam2|chr18 (15435666-15435448) | |
| 50-229, gnl|dasNov1|scaffold_538 (67569-67351) | |
| 50-229, gnl|echTel1|scaffold_313510 (83105-82888) | |
| 50-229, gnl|fr1|chrUn (119382913-119382697) | |
| 50-229, gnl|galGal2|chr1 (25612063-25611857) | |
| 50-229, gnl|hg17|chr7 (107410806-107411024) | |
| 50-229, gnl|Hg17|chr7 (107411005-107410826) | |
| 50-229, gnl|loxAfr1|scaffold_10879 (36619-36837) | |
| 50-229, gnl|mm7|chr12 (42544795-42544577) | |
| 50-229, gnl|Mm7|chr12 (42544594-42544773) | |
| 50-229, gnl|monDom2|scaffold_22 (44301832-44301615) | |
| 50-229, gnl|panTro1|chr6 (109327311-109327529) | |
| 50-229, gnl|rheMac2|chr3 (145602520-145602738) | |
| 50-229, gnl|rn3|chr6 (63992308-63992090) | |
| 50-229, gnl|tetNig1|chr19 (4121892-4122075) | |
| 50-229, gnl|xenTro1|scaffold_66 (745905-745686) | |
| 264-406, gnl|bosTau2|chr4 (19289747-19289606) | |
| 264-406, gnl|Hg17|chr7 (107394890-107394749) | |
| 264-406, gnl|Mm7|chr12 (42558099-42558239) | |
| 474-607, gnl|bosTau2|chr4 (19277913-19277780) | |
| 474-607, gnl|canFam2|chr18 (15460988-15460725) | |
| 474-607, gnl|danRer3|chr4 (11435537-11435795) | |
| 474-607, gnl|dasNov1|scaffold_538 (84182-83918) | |
| 474-607, gnl|echTel1|scaffold_313510 (121004-120739) | |
| 474-607, gnl|fr1|chrUn (119386584-119386329) | |
| 474-607, gnl|galGal2|chr1 (25638543-25638280) | |
| 474-607, gnl|hg17|chr7 (107384300-107384563) | |
| 474-607, gnl|Hg17|chr7 (107384546-107384413) | |
| 474-607, gnl|loxAfr1|scaffold_10879 (9480-9744) | |
| 474-607, gnl|mm7|chr12 (42566589-42566323) | |
| 474-607, gnl|Mm7|chr12 (42566340-42566473) | |
| 474-607, gnl|monDom2|scaffold_22 (44331099-44330826) | |
| 474-607, gnl|oryCun1|scaffold_197633 (981-706) | |
| 474-607, gnl|panTro1|chr6 (109300646-109300909) | |
| 474-607, gnl|rheMac2|chr3 (145576188-145576451) | |
| 474-607, gnl|rn3|chr6 (64015494-64015231) | |
| 474-607, gnl|tetNig1|chr19 (4118335-4118575) | |
| 474-607, gnl|xenTro1|scaffold_66 (763463-763203) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) |