Non-Coding RNA Search

rhyp29c_h9.y1

Sequence:


               
               ATAGCAGCGGGTGCAACTTTTTTTTTTTTTTGTATTTTTAAAAATATTGATTTTCATTTT
CGTGTTGACTAGAAAAAGCGAGCCGGCTTGGAGGAAGTCCGTCCGGCGATCCGAGTGCGC
ATTGATCAGTGTCGAGAGAAAAAAAAAGCTACATAAATATATATTATGTGGATAAAAAAA
AAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAGCAGCGGGTGCAACTTTTTTTTTTTTTTGTATTTTTAAAAATATTGATTTTCATTTT
CGTGTTGACTAGAAAAAGCGAGCCGGCTTGGAGGAAGTCCGTCCGGCGATCCGAGTGCGC
ATTGATCAGTGTCGAGAGAAAAAAAAAGCTACATAAATATATATTATGTGGATAAAAAAA
AAAAAAAAAAAAAAAA

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               67-176, gnl|bosTau2|chr16 (29291015-29291123)
               

               
               67-176, gnl|canFam2|chr7 (55692126-55691334)
               

               
               67-176, gnl|dasNov1|scaffold_3467 (53076-52284)
               

               
               67-176, gnl|echTel1|scaffold_312135 (221881-221154)
               

               
               67-176, gnl|hg17|chr18 (33400374-33401114)
               

               
               67-176, gnl|Hg17|chr18 (33400539-33400645)
               

               
               67-176, gnl|loxAfr1|scaffold_30477 (11082-11818)
               

               
               67-176, gnl|mm7|chr18 (26139198-26139949)
               

               
               67-176, gnl|Mm7|chr18 (26139379-26139488)
               

               
               67-176, gnl|monDom2|scaffold_4 (9030446-9029514)
               

               
               67-176, gnl|oryCun1|scaffold_212767 (281130-281848)
               

               
               67-176, gnl|panTro1|chr17 (29384791-29385531)
               

               
               67-176, gnl|rheMac2|chr18 (30482639-30483357)
               

               
               67-176, gnl|rn3|chr18 (17641656-17642409)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               67-176, gnl|bosTau2|chr16 (29291015-29291123)
               

               
               67-176, gnl|canFam2|chr7 (55692126-55691334)
               

               
               67-176, gnl|dasNov1|scaffold_3467 (53076-52284)
               

               
               67-176, gnl|echTel1|scaffold_312135 (221881-221154)
               

               
               67-176, gnl|hg17|chr18 (33400374-33401114)
               

               
               67-176, gnl|Hg17|chr18 (33400539-33400645)
               

               
               67-176, gnl|loxAfr1|scaffold_30477 (11082-11818)
               

               
               67-176, gnl|mm7|chr18 (26139198-26139949)
               

               
               67-176, gnl|Mm7|chr18 (26139379-26139488)
               

               
               67-176, gnl|monDom2|scaffold_4 (9030446-9029514)
               

               
               67-176, gnl|oryCun1|scaffold_212767 (281130-281848)
               

               
               67-176, gnl|panTro1|chr17 (29384791-29385531)
               

               
               67-176, gnl|rheMac2|chr18 (30482639-30483357)
               

               
               67-176, gnl|rn3|chr18 (17641656-17642409)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               hyp (0.142837)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)

	67-176, gnl\|bosTau2\|chr16 (29291015-29291123)
	67-176, gnl\|canFam2\|chr7 (55692126-55691334)
	67-176, gnl\|dasNov1\|scaffold_3467 (53076-52284)
	67-176, gnl\|echTel1\|scaffold_312135 (221881-221154)
	67-176, gnl\|hg17\|chr18 (33400374-33401114)
	67-176, gnl\|Hg17\|chr18 (33400539-33400645)
	67-176, gnl\|loxAfr1\|scaffold_30477 (11082-11818)
	67-176, gnl\|mm7\|chr18 (26139198-26139949)
	67-176, gnl\|Mm7\|chr18 (26139379-26139488)
	67-176, gnl\|monDom2\|scaffold_4 (9030446-9029514)
	67-176, gnl\|oryCun1\|scaffold_212767 (281130-281848)
	67-176, gnl\|panTro1\|chr17 (29384791-29385531)
	67-176, gnl\|rheMac2\|chr18 (30482639-30483357)
	67-176, gnl\|rn3\|chr18 (17641656-17642409)