Non-Coding RNA Search

rill302b_k4.y1

Sequence:


               
               CCTTTCTGTCAAGGAAGTGACAGTAATATCTAACAGATAACAACACAGCTTGCAGTCCAC
ATGGTATAGTTGCCTGAGCTACTTATCTTGTGATAGAGCTTTAACAGACAGGGTCTCTCA
TCAACTGCAGAAGGGACTTGATGACTACTAAGATTAGGTTCTGCCTTATACTAAATAATT
TGTAAATGAGAGGAAAAGAGAGAAGTCTGGGGGGGGCGTTATGTTTGTGCTTTTTGCAGT
TGTTTTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTTTTGTTTTATTTTCTTTTTAGGAC
TGTGCCTGTAgcatatggaagttcccaggttaggggtagattcagagctgcagctgccaa
cctatgccacagccacagcaatgcaggatcagagctgcatttgagacctacaccagagct
cacggcaatgccggatccttaatccactgagca

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTTTCTGTCAAGGAAGTGACAGTAATATCTAACAGATAACAACACAGCTTGCAGTCCAC
ATGGTATAGTTGCCTGAGCTACTTATCTTGTGATAGAGCTTTAACAGACAGGGTCTCTCA
TCAACTGCAGAAGGGACTTGATGACTACTAAGATTAGGTTCTGCCTTATACTAAATAATT
TGTAAATGAGAGGAAAAGAGAGAAGTCTGGGGGGGGCGTTATGTTTGTGCTTTTTGCAGT
TGTTTTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTTTTGTTTTATTTTCTTTTTAGGAC
TGTGCCTGTAgcatatggaagttcccaggttaggggtagattcagagctgcagctgccaa
cctatgccacagccacagcaatgcaggatcagagctgcatttgagacctacaccagagct
cacggcaatgccggatccttaatccactgagca

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               3-209, gnl|bosTau2|chr26 (31813506-31813305)
               

               
               3-209, gnl|canFam2|chr3 (16832037-16831737)
               

               
               3-209, gnl|dasNov1|scaffold_61045 (42515-42795)
               

               
               3-209, gnl|echTel1|scaffold_280899 (83447-83188)
               

               
               3-209, gnl|hg17|chr5 (95017063-95017342)
               

               
               3-209, gnl|Hg17|chr5 (95017204-95017406)
               

               
               3-209, gnl|loxAfr1|scaffold_34304 (11150-11445)
               

               
               3-209, gnl|mm7|chr13 (73015357-73015114)
               

               
               3-209, gnl|Mm7|chr13 (73015239-73014790)
               

               
               3-209, gnl|panTro1|chr4 (20151029-20150749)
               

               
               3-209, gnl|rheMac2|chr6 (91875870-91876165)
               

               
               3-209, gnl|rn3|chr2 (3075128-3074901)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-209, gnl|bosTau2|chr26 (31813506-31813305)
               

               
               3-209, gnl|canFam2|chr3 (16832037-16831737)
               

               
               3-209, gnl|dasNov1|scaffold_61045 (42515-42795)
               

               
               3-209, gnl|echTel1|scaffold_280899 (83447-83188)
               

               
               3-209, gnl|hg17|chr5 (95017063-95017342)
               

               
               3-209, gnl|Hg17|chr5 (95017204-95017406)
               

               
               3-209, gnl|loxAfr1|scaffold_34304 (11150-11445)
               

               
               3-209, gnl|mm7|chr13 (73015357-73015114)
               

               
               3-209, gnl|Mm7|chr13 (73015239-73014790)
               

               
               3-209, gnl|panTro1|chr4 (20151029-20150749)
               

               
               3-209, gnl|rheMac2|chr6 (91875870-91876165)
               

               
               3-209, gnl|rn3|chr2 (3075128-3074901)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ill (0.175593)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)

	3-209, gnl\|bosTau2\|chr26 (31813506-31813305)
	3-209, gnl\|canFam2\|chr3 (16832037-16831737)
	3-209, gnl\|dasNov1\|scaffold_61045 (42515-42795)
	3-209, gnl\|echTel1\|scaffold_280899 (83447-83188)
	3-209, gnl\|hg17\|chr5 (95017063-95017342)
	3-209, gnl\|Hg17\|chr5 (95017204-95017406)
	3-209, gnl\|loxAfr1\|scaffold_34304 (11150-11445)
	3-209, gnl\|mm7\|chr13 (73015357-73015114)
	3-209, gnl\|Mm7\|chr13 (73015239-73014790)
	3-209, gnl\|panTro1\|chr4 (20151029-20150749)
	3-209, gnl\|rheMac2\|chr6 (91875870-91876165)
	3-209, gnl\|rn3\|chr2 (3075128-3074901)