Non-Coding RNA Search

rill307b_f2.y1

Sequence:


               
               CTGGCCGTGCTGGCCCGCCACCGTGACCCCCAGCTCTTCTACAAGTTCTCGCCCATCCTC
ATCCGTCATATCCCTCGCCAGCTGGTGGACGCTTGGATTGAGCTGGGCAGTCGGCTGGAT
GCCCGGCAGCTCATCCCTGCCCTGGTGAACTATAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGCCGTGCTGGCCCGCCACCGTGACCCCCAGCTCTTCTACAAGTTCTCGCCCATCCTC
ATCCGTCATATCCCTCGCCAGCTGGTGGACGCTTGGATTGAGCTGGGCAGTCGGCTGGAT
GCCCGGCAGCTCATCCCTGCCCTGGTGAACTATAGC

Aligned organism(s): 19 entry(ies)

More info

Aligned organism(s): 19 entry(ies)

Help | Less info


               
               2-156, gnl|bosTau2|chr10 (25716493-25716647)
               

               
               2-156, gnl|canFam2|chr30 (11022348-11023195)
               

               
               2-156, gnl|danRer3|chr20 (38430507-38431344)
               

               
               2-156, gnl|dasNov1|scaffold_23107 (13696-14544)
               

               
               2-156, gnl|echTel1|scaffold_110928 (1012-195)
               

               
               2-156, gnl|fr1|chrUn (156715312-156714480)
               

               
               2-156, gnl|galGal2|chr5 (21567908-21568753)
               

               
               2-156, gnl|hg17|chr15 (38979678-38980525)
               

               
               2-156, gnl|Hg17|chr15 (38980056-38980210)
               

               
               2-156, gnl|loxAfr1|scaffold_2794 (83653-84498)
               

               
               2-156, gnl|mm7|chr2 (119034812-119035651)
               

               
               2-156, gnl|Mm7|chr2 (119035190-119035344)
               

               
               2-156, gnl|monDom2|scaffold_12 (1240696-1239847)
               

               
               2-156, gnl|oryCun1|scaffold_210939 (29799-30642)
               

               
               2-156, gnl|panTro1|chr16_random (10176368-10177215)
               

               
               2-156, gnl|rheMac2|chr7 (19291368-19292215)
               

               
               2-156, gnl|rn3|chr3 (105708567-105709406)
               

               
               2-156, gnl|tetNig1|chr14 (6668021-6668853)
               

               
               2-156, gnl|xenTro1|scaffold_852 (214927-215759)

Aligned organism(s): 19 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-156, gnl|bosTau2|chr10 (25716493-25716647)
               

               
               2-156, gnl|canFam2|chr30 (11022348-11023195)
               

               
               2-156, gnl|danRer3|chr20 (38430507-38431344)
               

               
               2-156, gnl|dasNov1|scaffold_23107 (13696-14544)
               

               
               2-156, gnl|echTel1|scaffold_110928 (1012-195)
               

               
               2-156, gnl|fr1|chrUn (156715312-156714480)
               

               
               2-156, gnl|galGal2|chr5 (21567908-21568753)
               

               
               2-156, gnl|hg17|chr15 (38979678-38980525)
               

               
               2-156, gnl|Hg17|chr15 (38980056-38980210)
               

               
               2-156, gnl|loxAfr1|scaffold_2794 (83653-84498)
               

               
               2-156, gnl|mm7|chr2 (119034812-119035651)
               

               
               2-156, gnl|Mm7|chr2 (119035190-119035344)
               

               
               2-156, gnl|monDom2|scaffold_12 (1240696-1239847)
               

               
               2-156, gnl|oryCun1|scaffold_210939 (29799-30642)
               

               
               2-156, gnl|panTro1|chr16_random (10176368-10177215)
               

               
               2-156, gnl|rheMac2|chr7 (19291368-19292215)
               

               
               2-156, gnl|rn3|chr3 (105708567-105709406)
               

               
               2-156, gnl|tetNig1|chr14 (6668021-6668853)
               

               
               2-156, gnl|xenTro1|scaffold_852 (214927-215759)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ill (0.175593)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)

	2-156, gnl\|bosTau2\|chr10 (25716493-25716647)
	2-156, gnl\|canFam2\|chr30 (11022348-11023195)
	2-156, gnl\|danRer3\|chr20 (38430507-38431344)
	2-156, gnl\|dasNov1\|scaffold_23107 (13696-14544)
	2-156, gnl\|echTel1\|scaffold_110928 (1012-195)
	2-156, gnl\|fr1\|chrUn (156715312-156714480)
	2-156, gnl\|galGal2\|chr5 (21567908-21568753)
	2-156, gnl\|hg17\|chr15 (38979678-38980525)
	2-156, gnl\|Hg17\|chr15 (38980056-38980210)
	2-156, gnl\|loxAfr1\|scaffold_2794 (83653-84498)
	2-156, gnl\|mm7\|chr2 (119034812-119035651)
	2-156, gnl\|Mm7\|chr2 (119035190-119035344)
	2-156, gnl\|monDom2\|scaffold_12 (1240696-1239847)
	2-156, gnl\|oryCun1\|scaffold_210939 (29799-30642)
	2-156, gnl\|panTro1\|chr16_random (10176368-10177215)
	2-156, gnl\|rheMac2\|chr7 (19291368-19292215)
	2-156, gnl\|rn3\|chr3 (105708567-105709406)
	2-156, gnl\|tetNig1\|chr14 (6668021-6668853)
	2-156, gnl\|xenTro1\|scaffold_852 (214927-215759)