Non-Coding RNA Search

rill313b_m19.y1

Sequence:


               
               GAATGTCAAAAGCAAAAATATGAAGGAAATTAAAACCCCTTTTATTAAAGTGATCTGTGA
AATTATTATTACTGGAAACAAGTAGACTTTAAGGCTTTTATTCCAGAAAAGAAGGACTTG
AGTGTCAGGCCTATATTAGGTTCTGAACCTTAATGCCATGTATTTGTACTCATTAAAATT
GTTTCATTGAAAAGTATATTTAGTAATAGAAACTTCTGGTCTAGTTGGGAGTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATGTCAAAAGCAAAAATATGAAGGAAATTAAAACCCCTTTTATTAAAGTGATCTGTGA
AATTATTATTACTGGAAACAAGTAGACTTTAAGGCTTTTATTCCAGAAAAGAAGGACTTG
AGTGTCAGGCCTATATTAGGTTCTGAACCTTAATGCCATGTATTTGTACTCATTAAAATT
GTTTCATTGAAAAGTATATTTAGTAATAGAAACTTCTGGTCTAGTTGGGAGTTTT

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

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               1-233, gnl|bosTau2|chr6 (39404566-39404336)
               

               
               1-233, gnl|canFam2|chr13 (51991670-51992271)
               

               
               1-233, gnl|dasNov1|scaffold_58072 (7744-7175)
               

               
               1-233, gnl|echTel1|scaffold_318344 (121094-120527)
               

               
               1-233, gnl|galGal2|chr4 (49771945-49771323)
               

               
               1-233, gnl|hg17|chr4 (57641455-57642057)
               

               
               1-233, gnl|Hg17|chr4 (57641510-57641742)
               

               
               1-233, gnl|loxAfr1|scaffold_8772 (88530-87899)
               

               
               1-233, gnl|mm7|chr5 (77216395-77216978)
               

               
               1-233, gnl|Mm7|chr5 (77216442-77216670)
               

               
               1-233, gnl|monDom2|scaffold_26 (20827541-20828166)
               

               
               1-233, gnl|oryCun1|scaffold_120630 (18102-18693)
               

               
               1-233, gnl|panTro1|chr3 (88984098-88983496)
               

               
               1-233, gnl|rheMac2|chr5 (72442490-72441893)
               

               
               1-233, gnl|rn3|chr14 (33134002-33133425)

Aligned organism(s): 15 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-233, gnl|bosTau2|chr6 (39404566-39404336)
               

               
               1-233, gnl|canFam2|chr13 (51991670-51992271)
               

               
               1-233, gnl|dasNov1|scaffold_58072 (7744-7175)
               

               
               1-233, gnl|echTel1|scaffold_318344 (121094-120527)
               

               
               1-233, gnl|galGal2|chr4 (49771945-49771323)
               

               
               1-233, gnl|hg17|chr4 (57641455-57642057)
               

               
               1-233, gnl|Hg17|chr4 (57641510-57641742)
               

               
               1-233, gnl|loxAfr1|scaffold_8772 (88530-87899)
               

               
               1-233, gnl|mm7|chr5 (77216395-77216978)
               

               
               1-233, gnl|Mm7|chr5 (77216442-77216670)
               

               
               1-233, gnl|monDom2|scaffold_26 (20827541-20828166)
               

               
               1-233, gnl|oryCun1|scaffold_120630 (18102-18693)
               

               
               1-233, gnl|panTro1|chr3 (88984098-88983496)
               

               
               1-233, gnl|rheMac2|chr5 (72442490-72441893)
               

               
               1-233, gnl|rn3|chr14 (33134002-33133425)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ill (0.175593)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)

	1-233, gnl\|bosTau2\|chr6 (39404566-39404336)
	1-233, gnl\|canFam2\|chr13 (51991670-51992271)
	1-233, gnl\|dasNov1\|scaffold_58072 (7744-7175)
	1-233, gnl\|echTel1\|scaffold_318344 (121094-120527)
	1-233, gnl\|galGal2\|chr4 (49771945-49771323)
	1-233, gnl\|hg17\|chr4 (57641455-57642057)
	1-233, gnl\|Hg17\|chr4 (57641510-57641742)
	1-233, gnl\|loxAfr1\|scaffold_8772 (88530-87899)
	1-233, gnl\|mm7\|chr5 (77216395-77216978)
	1-233, gnl\|Mm7\|chr5 (77216442-77216670)
	1-233, gnl\|monDom2\|scaffold_26 (20827541-20828166)
	1-233, gnl\|oryCun1\|scaffold_120630 (18102-18693)
	1-233, gnl\|panTro1\|chr3 (88984098-88983496)
	1-233, gnl\|rheMac2\|chr5 (72442490-72441893)
	1-233, gnl\|rn3\|chr14 (33134002-33133425)