Non-Coding RNA Search

rill318b_b21.y1

Sequence:


               
               GTCCCTTTGCTATCTGTGACTGTACGACTTTGACTCAGGCTGGATATGTAGGTGAAGATA
TTGAATCTGTGATTGCCAAACTGCTCCAGGATGCCAATTATAATGTAGAAAAAGCACAAC
AAGGAATTGTCTTTCTGGATGAAGTAGATAAGATTGGCAGTGTGCCAGGCATTCATCAGT
TACGGGATGTAGGTGGAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCCCTTTGCTATCTGTGACTGTACGACTTTGACTCAGGCTGGATATGTAGGTGAAGATA
TTGAATCTGTGATTGCCAAACTGCTCCAGGATGCCAATTATAATGTAGAAAAAGCACAAC
AAGGAATTGTCTTTCTGGATGAAGTAGATAAGATTGGCAGTGTGCCAGGCATTCATCAGT
TACGGGATGTAGGTGGAGA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               1-127, gnl|bosTau2|chr10 (8541592-8541465)
               

               
               1-127, gnl|canFam2|chrX (125946669-125946754)
               

               
               1-127, gnl|dasNov1|scaffold_232955 (1611-1511)
               

               
               1-127, gnl|echTel1|scaffold_310677 (4347-4263)
               

               
               1-127, gnl|Hg17|chr15 (63237260-63237133)
               

               
               1-127, gnl|hg17|chrX (153689886-153689971)
               

               
               1-127, gnl|mm7|chr9 (65347135-65347050)
               

               
               1-127, gnl|Mm7|chr9 (65347011-65347138)
               

               
               1-127, gnl|oryCun1|scaffold_202026 (37841-37926)
               

               
               1-127, gnl|panTro1|chrX (158986330-158986415)
               

               
               1-127, gnl|rheMac2|chrX (152904086-152904172)
               

               
               1-127, gnl|rn3|chr8 (69579152-69579067)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-127, gnl|bosTau2|chr10 (8541592-8541465)
               

               
               1-127, gnl|canFam2|chrX (125946669-125946754)
               

               
               1-127, gnl|dasNov1|scaffold_232955 (1611-1511)
               

               
               1-127, gnl|echTel1|scaffold_310677 (4347-4263)
               

               
               1-127, gnl|Hg17|chr15 (63237260-63237133)
               

               
               1-127, gnl|hg17|chrX (153689886-153689971)
               

               
               1-127, gnl|mm7|chr9 (65347135-65347050)
               

               
               1-127, gnl|Mm7|chr9 (65347011-65347138)
               

               
               1-127, gnl|oryCun1|scaffold_202026 (37841-37926)
               

               
               1-127, gnl|panTro1|chrX (158986330-158986415)
               

               
               1-127, gnl|rheMac2|chrX (152904086-152904172)
               

               
               1-127, gnl|rn3|chr8 (69579152-69579067)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ill (0.175593)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)

	1-127, gnl\|bosTau2\|chr10 (8541592-8541465)
	1-127, gnl\|canFam2\|chrX (125946669-125946754)
	1-127, gnl\|dasNov1\|scaffold_232955 (1611-1511)
	1-127, gnl\|echTel1\|scaffold_310677 (4347-4263)
	1-127, gnl\|Hg17\|chr15 (63237260-63237133)
	1-127, gnl\|hg17\|chrX (153689886-153689971)
	1-127, gnl\|mm7\|chr9 (65347135-65347050)
	1-127, gnl\|Mm7\|chr9 (65347011-65347138)
	1-127, gnl\|oryCun1\|scaffold_202026 (37841-37926)
	1-127, gnl\|panTro1\|chrX (158986330-158986415)
	1-127, gnl\|rheMac2\|chrX (152904086-152904172)
	1-127, gnl\|rn3\|chr8 (69579152-69579067)