rjca04c_i14.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGGATCGAAGTGCTGACTTTCTGGGCAAAGTTGCTATACCACTGCTGTCTATTCAAAAT GGTGAACAGAAAGCCTACGTCTTGAAAAACAAGCAGCTGACAGGGCCAACAAAGGGGGTC ATCTATCTTGAAATAGATGTGATTTTTAATGCTGTGAAAGCCAGCTTACGAACATTAATA CCCAAAGAACAGAAGTACATTGAAGAGGAAAACAGACTCTCTAAACAGCTACTCCTAAGA AACTTTATCAGAATGAAGCGTTGTGTCATGGTGCTCGTAAATGCTGCATACTACGTTAAT AGTTGCTTTGACTGGGCTTCACCCCCAAGGAGCCTCGCTGCTTTTGTGCTTTTTCTCTTT GTTGTCTGGAACTTTGAGCTCTACATGATACCACTGGTTTTGTTGTTACTGTTGACATGG AACTACTTCTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGGATCGAAGTGCTGACTTTCTGGGCAAAGTTGCTATACCACTGCTGTCTATTCAAAAT GGTGAACAGAAAGCCTACGTCTTGAAAAACAAGCAGCTGACAGGGCCAACAAAGGGGGTC ATCTATCTTGAAATAGATGTGATTTTTAATGCTGTGAAAGCCAGCTTACGAACATTAATA CCCAAAGAACAGAAGTACATTGAAGAGGAAAACAGACTCTCTAAACAGCTACTCCTAAGA AACTTTATCAGAATGAAGCGTTGTGTCATGGTGCTCGTAAATGCTGCATACTACGTTAAT AGTTGCTTTGACTGGGCTTCACCCCCAAGGAGCCTCGCTGCTTTTGTGCTTTTTCTCTTT GTTGTCTGGAACTTTGAGCTCTACATGATACCACTGGTTTTGTTGTTACTGTTGACATGG AACTACTTCTTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 52-155, - strand, RNAz p=0.783975 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 52-155, - strand, RNAz p=0.783975 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 52-155, gnl|bosTau2|chr7 (58705915-58705812) | |
| 52-155, gnl|Hg17|chr5 (94232434-94232331) | |
| 52-155, gnl|Mm7|chr13 (73838870-73838973) | |
| 225-348, gnl|bosTau2|chr7 (58703146-58703023) | |
| 225-348, gnl|Hg17|chr5 (94229917-94229794) | |
| 225-348, gnl|Mm7|chr13 (73841342-73841465) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 52-155, gnl|bosTau2|chr7 (58705915-58705812) | |
| 52-155, gnl|Hg17|chr5 (94232434-94232331) | |
| 52-155, gnl|Mm7|chr13 (73838870-73838973) | |
| 225-348, gnl|bosTau2|chr7 (58703146-58703023) | |
| 225-348, gnl|Hg17|chr5 (94229917-94229794) | |
| 225-348, gnl|Mm7|chr13 (73841342-73841465) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jca (0.11396) |