Non-Coding RNA Search

rjca07c_l10.y1

Sequence:


               
               GTCTCAGGACAGTCCAAAGCAAGCTGTCCATGAGGATGACACACCCACCTTTCCTCGTGT
CCCCCTCACAAGACAGCAGACAGCATTACTGAGCATCTTCCTCACCCCCCAAATACAACC
AATCAGAAAACTACATTATTACACAAAGAAGAATGCTGGCATTTGAAAAGTTACATACCA
TTAATGGTGGGCATGCAAGTGAATTTAAGAAGATTCATTAAATATCTTCATGCTTTTCCT
GGCTGCAAGCTAGGTAAACTGACCTCCACTTATCGGTTCCTTAATTTCTTAACTCTTGAG
GTGCATTTCTGTTTCACAGACATGGGCAGTTTCCTTTTCTGTGAAATAGTTCTCCTGGAT
AGTAATTCTCAGGATGAATTTCTGCATTGGTAAATAATGCCTTATTTTGGTAAATTACAT
TTTATTTATTTTAAAGTTTAAAAATGGGGGCTGAAATGAGTCACATGTTATAGAAAACAT
AACTACACCAATATGCTATTAACCAGACGGTCAAAGAATTCTTATAGTACATACACATAT
ATAAAATACATAGAATAGTGATAGCGTCTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCTCAGGACAGTCCAAAGCAAGCTGTCCATGAGGATGACACACCCACCTTTCCTCGTGT
CCCCCTCACAAGACAGCAGACAGCATTACTGAGCATCTTCCTCACCCCCCAAATACAACC
AATCAGAAAACTACATTATTACACAAAGAAGAATGCTGGCATTTGAAAAGTTACATACCA
TTAATGGTGGGCATGCAAGTGAATTTAAGAAGATTCATTAAATATCTTCATGCTTTTCCT
GGCTGCAAGCTAGGTAAACTGACCTCCACTTATCGGTTCCTTAATTTCTTAACTCTTGAG
GTGCATTTCTGTTTCACAGACATGGGCAGTTTCCTTTTCTGTGAAATAGTTCTCCTGGAT
AGTAATTCTCAGGATGAATTTCTGCATTGGTAAATAATGCCTTATTTTGGTAAATTACAT
TTTATTTATTTTAAAGTTTAAAAATGGGGGCTGAAATGAGTCACATGTTATAGAAAACAT
AACTACACCAATATGCTATTAACCAGACGGTCAAAGAATTCTTATAGTACATACACATAT
ATAAAATACATAGAATAGTGATAGCGTCTAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               61-568, gnl|bosTau2|chr9 (61794859-61794353)
               

               
               61-568, gnl|Hg17|chr6 (163965912-163966448)
               

               
               61-568, gnl|Mm7|chr17 (8924709-8924238)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               61-568, gnl|bosTau2|chr9 (61794859-61794353)
               

               
               61-568, gnl|Hg17|chr6 (163965912-163966448)
               

               
               61-568, gnl|Mm7|chr17 (8924709-8924238)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jca (0.11396)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.11396)

	61-568, gnl\|bosTau2\|chr9 (61794859-61794353)
	61-568, gnl\|Hg17\|chr6 (163965912-163966448)
	61-568, gnl\|Mm7\|chr17 (8924709-8924238)