Non-Coding RNA Search

rjca09c_e17.y1

Sequence:


               
               CGGCAGCGCGTGGGCCCCGTCTCTGTCATCGGGGTGACCACTGCCGAGGAGGAGACCCCC
AGCCCCACGGAGATGGAGGAGACCCCCAGCCCCACGGAACGCCCCGAGGAGCCCATCCTG
GGGGAGCTGACGGTGACAGGATCCTCCCCGGACTCTCTGAGCCTCTCGTGGACGGTCCCC
CAGGGCCACTTGGACTCCTTCACCGTGCAGTACAAGGGCAGGGCCGGGCCCCAGGTGGTG
CGTGTCGGGGGCGAGGAGAGCGAGGTGACAGTTGAGGGCCTGGAGGCTGGACGCAAGTAC
AAGATGCACCTGTACGGCCTACATAGGGGGCAGCGCGTGGGCCCTGTGTCCACCGTGGGT
GTGACCGGTGAGTGAGGGCGGGGCCCTTGTTGGTTTTCCTCCCACCCGTGGCAACCGGCC
TCCCTGTGGCAGTGGCCTCCCTTGCTGTAATGGAACAGGAGCTTGGGGAAGAACTAGAAA
GAATAGTTCACTGGAGACTGGACTACGACCAGCTACACGACCTTGAGCAAGTTTTAAACT
TTCTGTGCCTGTTTCCTCATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGCAGCGCGTGGGCCCCGTCTCTGTCATCGGGGTGACCACTGCCGAGGAGGAGACCCCC
AGCCCCACGGAGATGGAGGAGACCCCCAGCCCCACGGAACGCCCCGAGGAGCCCATCCTG
GGGGAGCTGACGGTGACAGGATCCTCCCCGGACTCTCTGAGCCTCTCGTGGACGGTCCCC
CAGGGCCACTTGGACTCCTTCACCGTGCAGTACAAGGGCAGGGCCGGGCCCCAGGTGGTG
CGTGTCGGGGGCGAGGAGAGCGAGGTGACAGTTGAGGGCCTGGAGGCTGGACGCAAGTAC
AAGATGCACCTGTACGGCCTACATAGGGGGCAGCGCGTGGGCCCTGTGTCCACCGTGGGT
GTGACCGGTGAGTGAGGGCGGGGCCCTTGTTGGTTTTCCTCCCACCCGTGGCAACCGGCC
TCCCTGTGGCAGTGGCCTCCCTTGCTGTAATGGAACAGGAGCTTGGGGAAGAACTAGAAA
GAATAGTTCACTGGAGACTGGACTACGACCAGCTACACGACCTTGAGCAAGTTTTAAACT
TTCTGTGCCTGTTTCCTCATCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               38-374, gnl|bosTau2|chr23 (23616092-23615757)
               

               
               38-374, gnl|Hg17|chr6 (32134143-32132334)
               

               
               38-374, gnl|Mm7|chr17 (32783593-32783902)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               38-374, gnl|bosTau2|chr23 (23616092-23615757)
               

               
               38-374, gnl|Hg17|chr6 (32134143-32132334)
               

               
               38-374, gnl|Mm7|chr17 (32783593-32783902)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jca (0.11396)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.11396)

	38-374, gnl\|bosTau2\|chr23 (23616092-23615757)
	38-374, gnl\|Hg17\|chr6 (32134143-32132334)
	38-374, gnl\|Mm7\|chr17 (32783593-32783902)