Non-Coding RNA Search

rjca14c_c6.y1

Sequence:


               
               GCAGCCTCCTGGGCCGGCCTGGGGAGCAGCTGTATACACCCAGCGGGAACGTCGTGCCCA
GACACTGGTTCCGCATCAAACACTTGCCCTACACAACCCGCCGGGACTTGGTACTGCAGC
TGTGGAGGGCAGCGCACAGCTCCAGCAGCTCCTGAGGGCCTCCTCCCCAGGACTGGTCCA
GCTCCAGCCAGTGCCTTCCCACCATGGACTCTTGGGGGGGCGCCCTTGGAGCCTCTGCGC
CCAGAGCCCGGGATCAGAAAATTCACAGGCTTTGGAGTTAAACAGTCCAGACTCTACCCC
AGTCCACCACCTATGATCTCCATGACCTTGGGCCCATCCCTTTATGAATCTGAGCCTTGG
TTTCCTCTACTGTGAATTGGGAGTGATGCGAACTCCTGATGGTGTTGTGGGGTTGCATGA
GATCATGAACGCAAGGTCCTGGGAGAGGGGGTGCCATGGGAGATCCTTCTTTCTGGCTCT
TGGAATCCAGAGGGCTGTGGAGGTCAGGCCACATCCTCCTGCGAGAGGTGAAGCCAGCTC
TTTCTTACAGCGAGGAATCACCCCATCATTTGCCTGGTGGTCTGATGGCAATCTCCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGCCTCCTGGGCCGGCCTGGGGAGCAGCTGTATACACCCAGCGGGAACGTCGTGCCCA
GACACTGGTTCCGCATCAAACACTTGCCCTACACAACCCGCCGGGACTTGGTACTGCAGC
TGTGGAGGGCAGCGCACAGCTCCAGCAGCTCCTGAGGGCCTCCTCCCCAGGACTGGTCCA
GCTCCAGCCAGTGCCTTCCCACCATGGACTCTTGGGGGGGCGCCCTTGGAGCCTCTGCGC
CCAGAGCCCGGGATCAGAAAATTCACAGGCTTTGGAGTTAAACAGTCCAGACTCTACCCC
AGTCCACCACCTATGATCTCCATGACCTTGGGCCCATCCCTTTATGAATCTGAGCCTTGG
TTTCCTCTACTGTGAATTGGGAGTGATGCGAACTCCTGATGGTGTTGTGGGGTTGCATGA
GATCATGAACGCAAGGTCCTGGGAGAGGGGGTGCCATGGGAGATCCTTCTTTCTGGCTCT
TGGAATCCAGAGGGCTGTGGAGGTCAGGCCACATCCTCCTGCGAGAGGTGAAGCCAGCTC
TTTCTTACAGCGAGGAATCACCCCATCATTTGCCTGGTGGTCTGATGGCAATCTCCTCT

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-211, gnl|bosTau2|chr2 (44052684-44052475)
               

               
               1-211, gnl|Hg17|chr2 (120155441-120155651)
               

               
               1-211, gnl|Mm7|chr1 (119770685-119770475)
               


               
               239-598, gnl|bosTau2|chr2 (44052468-44052098)
               

               
               239-598, gnl|Hg17|chr2 (120155658-120156230)
               

               
               239-598, gnl|Mm7|chr1 (119770449-119770093)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-211, gnl|bosTau2|chr2 (44052684-44052475)
               

               
               1-211, gnl|Hg17|chr2 (120155441-120155651)
               

               
               1-211, gnl|Mm7|chr1 (119770685-119770475)
               


               
               239-598, gnl|bosTau2|chr2 (44052468-44052098)
               

               
               239-598, gnl|Hg17|chr2 (120155658-120156230)
               

               
               239-598, gnl|Mm7|chr1 (119770449-119770093)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jca (0.11396)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.11396)

	1-211, gnl\|bosTau2\|chr2 (44052684-44052475)
	1-211, gnl\|Hg17\|chr2 (120155441-120155651)
	1-211, gnl\|Mm7\|chr1 (119770685-119770475)

	239-598, gnl\|bosTau2\|chr2 (44052468-44052098)
	239-598, gnl\|Hg17\|chr2 (120155658-120156230)
	239-598, gnl\|Mm7\|chr1 (119770449-119770093)