Non-Coding RNA Search

rjca25c_i23.y1

Sequence:


               
               CCTggctaggggttgaatcagagctgtagcctccagcctttgccacagccacagcaacgc
gggatctgagcctcgtctgtagcctacacaacagctcatggcaacgccagatccttaact
cactgagcgaggccagggatcgaaccttcaaacctcatggttcctagtcggattcattaa
ccactgagccacgacgggGAACTCCTCATCCTTTGCTTTTGATGGCCCCTTTAAGAAATC
TTTTTCCAGCCTCCTCAAGGGCTGGAAAGTGCAGCCCTCCGGAGGGAGAGGTGGCAACTC
TGCTGTAATCAAGTCTGTCAGCCTCCAACAGGGACGCAGCATTTCAATGCCAGGCAGGTG
TCCTAAATGAACAACGTGGGCCCGGCGAGTGAACACCCTCCCCTGCAAAGGGACAGCTAT
CCCCCGGGCCCAGGCAACCCGTGCCTCCCAGGAATGTGGGCCCAGATTTTCCAAACCTTG
GGCTTCTTTAAGAGAAACTTGAAACCTGAATTTTTCTGTGAAATGTCCCTATTTTTAAAA
AAGTCGAGCTCAGTTATTTTTAAAACGGTATGTAGGCCAACACAACATGTCTGTGGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTggctaggggttgaatcagagctgtagcctccagcctttgccacagccacagcaacgc
gggatctgagcctcgtctgtagcctacacaacagctcatggcaacgccagatccttaact
cactgagcgaggccagggatcgaaccttcaaacctcatggttcctagtcggattcattaa
ccactgagccacgacgggGAACTCCTCATCCTTTGCTTTTGATGGCCCCTTTAAGAAATC
TTTTTCCAGCCTCCTCAAGGGCTGGAAAGTGCAGCCCTCCGGAGGGAGAGGTGGCAACTC
TGCTGTAATCAAGTCTGTCAGCCTCCAACAGGGACGCAGCATTTCAATGCCAGGCAGGTG
TCCTAAATGAACAACGTGGGCCCGGCGAGTGAACACCCTCCCCTGCAAAGGGACAGCTAT
CCCCCGGGCCCAGGCAACCCGTGCCTCCCAGGAATGTGGGCCCAGATTTTCCAAACCTTG
GGCTTCTTTAAGAGAAACTTGAAACCTGAATTTTTCTGTGAAATGTCCCTATTTTTAAAA
AAGTCGAGCTCAGTTATTTTTAAAACGGTATGTAGGCCAACACAACATGTCTGTGGGCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               205-599, gnl|bosTau2|chr8 (43077215-43077614)
               

               
               205-599, gnl|Hg17|chr9 (84657491-84657887)
               

               
               205-599, gnl|Mm7|chr13 (58029204-58029596)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               205-599, gnl|bosTau2|chr8 (43077215-43077614)
               

               
               205-599, gnl|Hg17|chr9 (84657491-84657887)
               

               
               205-599, gnl|Mm7|chr13 (58029204-58029596)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jca (0.11396)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.11396)

	205-599, gnl\|bosTau2\|chr8 (43077215-43077614)
	205-599, gnl\|Hg17\|chr9 (84657491-84657887)
	205-599, gnl\|Mm7\|chr13 (58029204-58029596)