rjca31c_g5.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTCGAGAGGGTCTGCAGGACCTGGCACCTGCTGAGGGCAGCCTCTGGGTCGTGGGTCAGG TGTCTACACGGCCCCTCAGGCCCACCAGGTGATCCCCAGCGCACTAACTGGAGATCCCTG GGATGGATCATTGGGCGAAGGTGTGTCGGCCATAGCCTAGAGCCCCAAAGGTTTCCTTTT AAACCGGAATGCCATGAAAACTGAGTGCTTTCAGTGATGCTCCTTATTTATTTCCCCTGT GGGGGAAGCACCGCCCACCTTCTAGAAGGATGCTGGGAGTTGGCGGAAGTGGGCGGTTCC CTTGTCGAGCCCCCTGCTGGGACGCTGTGCTTCCTCCAGGCAGGCCCCCCTGGCATCCTG GCGCTGCTGGACGAGGAGTGCTGGTTCCCCAAAGCCACGGACAAGAGCTTCGTGGAGAAG GTGATGCAGGAGCAGGGCACCCACCCCAAGTTCCAGAAGCCCAAGCAGCTGAAGGACAAA GCTGATTTCTGCATCATCCACTATGCCGGCAAGGTGAGGAGCAAACAAGGGAAGTGCCGG CCCGGCCCGACCTTCGTGGGAGATTCTGAGTCCTGCGCCCTGAGGTGGGGGAGGGGCACA GTATTCTAGTCCCATAACTCATCTGATAAGGGGTCTGGTGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTCGAGAGGGTCTGCAGGACCTGGCACCTGCTGAGGGCAGCCTCTGGGTCGTGGGTCAGG TGTCTACACGGCCCCTCAGGCCCACCAGGTGATCCCCAGCGCACTAACTGGAGATCCCTG GGATGGATCATTGGGCGAAGGTGTGTCGGCCATAGCCTAGAGCCCCAAAGGTTTCCTTTT AAACCGGAATGCCATGAAAACTGAGTGCTTTCAGTGATGCTCCTTATTTATTTCCCCTGT GGGGGAAGCACCGCCCACCTTCTAGAAGGATGCTGGGAGTTGGCGGAAGTGGGCGGTTCC CTTGTCGAGCCCCCTGCTGGGACGCTGTGCTTCCTCCAGGCAGGCCCCCCTGGCATCCTG GCGCTGCTGGACGAGGAGTGCTGGTTCCCCAAAGCCACGGACAAGAGCTTCGTGGAGAAG GTGATGCAGGAGCAGGGCACCCACCCCAAGTTCCAGAAGCCCAAGCAGCTGAAGGACAAA GCTGATTTCTGCATCATCCACTATGCCGGCAAGGTGAGGAGCAAACAAGGGAAGTGCCGG CCCGGCCCGACCTTCGTGGGAGATTCTGAGTCCTGCGCCCTGAGGTGGGGGAGGGGCACA GTATTCTAGTCCCATAACTCATCTGATAAGGGGTCTGGTGGC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 162-281, - strand, RNAz p=0.791599 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 162-281, - strand, RNAz p=0.791599 |
| Aligned organism(s): 8 entry(ies) | More info |
| Aligned organism(s): 8 entry(ies) | Help | Less info |
| 5-281, gnl|bosTau2|chr5 (45675335-45675607) | |
| 5-281, gnl|Hg17|chr22 (35033131-35032853) | |
| 295-519, gnl|bosTau2|chr5 (45675653-45675878) | |
| 295-519, gnl|Hg17|chr22 (35032818-35032588) | |
| 295-519, gnl|Mm7|chr15 (77868259-77868039) | |
| 330-515, gnl|bosTau2|chr25 (16292676-16292492) | |
| 330-515, gnl|Hg17|chr16 (15757881-15757697) | |
| 330-515, gnl|Mm7|chr16 (13777390-13777199) |
| Aligned organism(s): 8 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-281, gnl|bosTau2|chr5 (45675335-45675607) | |
| 5-281, gnl|Hg17|chr22 (35033131-35032853) | |
| 295-519, gnl|bosTau2|chr5 (45675653-45675878) | |
| 295-519, gnl|Hg17|chr22 (35032818-35032588) | |
| 295-519, gnl|Mm7|chr15 (77868259-77868039) | |
| 330-515, gnl|bosTau2|chr25 (16292676-16292492) | |
| 330-515, gnl|Hg17|chr16 (15757881-15757697) | |
| 330-515, gnl|Mm7|chr16 (13777390-13777199) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jca (0.11396) |