Non-Coding RNA Search

rjca33c_b8.y1

Sequence:


               
               CTTACCCGGAACAGACACAGAATGTGATAGATCTTACAGATGATTTTTTATAAGTACATG
AGTGGTCTCCACACAAGTTAGGAAAGTTGCTGGAAATCTGAGGAGGTTTTCAGGATACCT
GAAAGCCAGAGTCCACTTAGCCATTGTTTGAAGAAAACAATTTCAGGCATTTCAAAGGAA
GAGATCTCTCAGACAACTGGCTGTTCCTGCTTCAAACCAGCTCCCATCCTCCCCACCCAC
CACCCCATCAGAGGGCCATTAGAATGCTGTTGGAAATGGTGGTGGTTTTTCAGCAAATAC
CAGGTTCTCCCACTTCAAAGAACAGTCAGCAGAGCGCAACTTTCCACTTAGAGTAGAAGC
CTCCATTCTTCAACCCTGGGAGAAACAACAGCATTCTCTATAACCCAAGTTGGGAAACTA
GAAGCAAATTGTCAATGGACCTAGAACACCCATCTTCCACTTCTTAGTCCTTCTCTGAAC
AAGGAGAAGAGTTGTAATTACAGTTTTCAGACGTGATATGAAAACTTAGTCAGCATGGAG
ACGCTGCTGTCAAGCTGGGCTGCCATTTGAGCTCGAGAGGAAGGAAATCCTTGGAAAGCT
AAGCCACTGAAATCTGGCATGTGTTTTGCACTCACAGTACCTCTCAATTTGGAGCAACCA
AGTTTCAATTGCTCACCAGTCACATGTGACGAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTACCCGGAACAGACACAGAATGTGATAGATCTTACAGATGATTTTTTATAAGTACATG
AGTGGTCTCCACACAAGTTAGGAAAGTTGCTGGAAATCTGAGGAGGTTTTCAGGATACCT
GAAAGCCAGAGTCCACTTAGCCATTGTTTGAAGAAAACAATTTCAGGCATTTCAAAGGAA
GAGATCTCTCAGACAACTGGCTGTTCCTGCTTCAAACCAGCTCCCATCCTCCCCACCCAC
CACCCCATCAGAGGGCCATTAGAATGCTGTTGGAAATGGTGGTGGTTTTTCAGCAAATAC
CAGGTTCTCCCACTTCAAAGAACAGTCAGCAGAGCGCAACTTTCCACTTAGAGTAGAAGC
CTCCATTCTTCAACCCTGGGAGAAACAACAGCATTCTCTATAACCCAAGTTGGGAAACTA
GAAGCAAATTGTCAATGGACCTAGAACACCCATCTTCCACTTCTTAGTCCTTCTCTGAAC
AAGGAGAAGAGTTGTAATTACAGTTTTCAGACGTGATATGAAAACTTAGTCAGCATGGAG
ACGCTGCTGTCAAGCTGGGCTGCCATTTGAGCTCGAGAGGAAGGAAATCCTTGGAAAGCT
AAGCCACTGAAATCTGGCATGTGTTTTGCACTCACAGTACCTCTCAATTTGGAGCAACCA
AGTTTCAATTGCTCACCAGTCACATGTGACGAATG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-335, gnl|bosTau2|chr1 (74926399-74926709)
               

               
               1-335, gnl|Hg17|chr3 (151528445-151528782)
               

               
               1-335, gnl|Mm7|chr3 (58447055-58447346)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-335, gnl|bosTau2|chr1 (74926399-74926709)
               

               
               1-335, gnl|Hg17|chr3 (151528445-151528782)
               

               
               1-335, gnl|Mm7|chr3 (58447055-58447346)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jca (0.11396)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.11396)

	1-335, gnl\|bosTau2\|chr1 (74926399-74926709)
	1-335, gnl\|Hg17\|chr3 (151528445-151528782)
	1-335, gnl\|Mm7\|chr3 (58447055-58447346)