Non-Coding RNA Search

rjej01b_f16.y1

Sequence:


               
               AAAATGGTGATCACTAATTGCTATTTGTAAATAAACACAGTACTAAAACTTGTGTGTAAT
CAGAATACCTCAGAAGAGCTCAGTAAATTCAGACAAAACAGAATGCCTGCTGTATACTCT
GCCTCCTTTTAGATGTTTGTTTCCAAACAATACAAATAGCAAGGGTGGCCACTTTCCTGT
GTTAACATAAATTAAGGCATTTTGGAGGTTTTAATTCACTTAATTAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAATGGTGATCACTAATTGCTATTTGTAAATAAACACAGTACTAAAACTTGTGTGTAAT
CAGAATACCTCAGAAGAGCTCAGTAAATTCAGACAAAACAGAATGCCTGCTGTATACTCT
GCCTCCTTTTAGATGTTTGTTTCCAAACAATACAAATAGCAAGGGTGGCCACTTTCCTGT
GTTAACATAAATTAAGGCATTTTGGAGGTTTTAATTCACTTAATTAAC

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

Help | Less info


               
               2-196, gnl|bosTau2|chr11 (53281957-53282151)
               

               
               2-196, gnl|canFam2|chr17 (22099794-22100034)
               

               
               2-196, gnl|dasNov1|scaffold_3899 (81001-80774)
               

               
               2-196, gnl|echTel1|scaffold_281632 (3472-3170)
               

               
               2-196, gnl|hg17|chr2 (24897541-24897779)
               

               
               2-196, gnl|Hg17|chr2 (24897578-24897770)
               

               
               2-196, gnl|mm7|chr12 (4179758-4179588)
               

               
               2-196, gnl|oryCun1|scaffold_108643 (5030-5251)
               

               
               2-196, gnl|panTro1|chr12 (25775953-25776192)
               

               
               2-196, gnl|rheMac2|chr13 (24682577-24682804)
               

               
               2-196, gnl|rn3|chr6 (27233156-27232943)

Aligned organism(s): 11 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-196, gnl|bosTau2|chr11 (53281957-53282151)
               

               
               2-196, gnl|canFam2|chr17 (22099794-22100034)
               

               
               2-196, gnl|dasNov1|scaffold_3899 (81001-80774)
               

               
               2-196, gnl|echTel1|scaffold_281632 (3472-3170)
               

               
               2-196, gnl|hg17|chr2 (24897541-24897779)
               

               
               2-196, gnl|Hg17|chr2 (24897578-24897770)
               

               
               2-196, gnl|mm7|chr12 (4179758-4179588)
               

               
               2-196, gnl|oryCun1|scaffold_108643 (5030-5251)
               

               
               2-196, gnl|panTro1|chr12 (25775953-25776192)
               

               
               2-196, gnl|rheMac2|chr13 (24682577-24682804)
               

               
               2-196, gnl|rn3|chr6 (27233156-27232943)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               jej (0.0989218)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.0989218)

	2-196, gnl\|bosTau2\|chr11 (53281957-53282151)
	2-196, gnl\|canFam2\|chr17 (22099794-22100034)
	2-196, gnl\|dasNov1\|scaffold_3899 (81001-80774)
	2-196, gnl\|echTel1\|scaffold_281632 (3472-3170)
	2-196, gnl\|hg17\|chr2 (24897541-24897779)
	2-196, gnl\|Hg17\|chr2 (24897578-24897770)
	2-196, gnl\|mm7\|chr12 (4179758-4179588)
	2-196, gnl\|oryCun1\|scaffold_108643 (5030-5251)
	2-196, gnl\|panTro1\|chr12 (25775953-25776192)
	2-196, gnl\|rheMac2\|chr13 (24682577-24682804)
	2-196, gnl\|rn3\|chr6 (27233156-27232943)