Non-Coding RNA Search

rjej09b_f10.y1

Sequence:


               
               GTGCGCCGCCGCCTGGCGGACATCCTGCACCGCCGCTGTCCTCTCTTGCGCCCCTGGCTC
CGCCGGCGATGCGTGGTGTGCCAGGCATCCGAGACGCCCGAGTCCTACGTGTGCCCTACG
CCTGACTGCGAGACGGTGTACTGCCGATCCTGCTGGAACGATATGCGGCAGCGGTGCCCG
GTCTGCACACCCCGCGAGGAGCTCTCCTCCTCCGCCTACAGCGACAGCAACGATGACGCT
ACCTATGCAGAGTGAAGGGGGTTCCTCCTCGCTCTCCCACATGCTCCTTCCTGTTTAATA
AATGCTTAGTACACTCaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaa

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCGCCGCCGCCTGGCGGACATCCTGCACCGCCGCTGTCCTCTCTTGCGCCCCTGGCTC
CGCCGGCGATGCGTGGTGTGCCAGGCATCCGAGACGCCCGAGTCCTACGTGTGCCCTACG
CCTGACTGCGAGACGGTGTACTGCCGATCCTGCTGGAACGATATGCGGCAGCGGTGCCCG
GTCTGCACACCCCGCGAGGAGCTCTCCTCCTCCGCCTACAGCGACAGCAACGATGACGCT
ACCTATGCAGAGTGAAGGGGGTTCCTCCTCGCTCTCCCACATGCTCCTTCCTGTTTAATA
AATGCTTAGTACACTCaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaa

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q71S70_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q71S70_HUMAN

Aligned organism(s): 13 entry(ies)

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Aligned organism(s): 13 entry(ies)

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               3-316, gnl|bosTau2|chr3 (9140991-9141305)
               

               
               3-316, gnl|canFam2|chr7 (45417008-45416601)
               

               
               3-316, gnl|dasNov1|scaffold_56035 (6563-7045)
               

               
               3-316, gnl|hg17|chr1 (151836156-151836609)
               

               
               3-316, gnl|Hg17|chr1 (151836165-151836474)
               

               
               3-316, gnl|loxAfr1|scaffold_12583 (61946-61472)
               

               
               3-316, gnl|mm7|chr3 (89477190-89476781)
               

               
               3-316, gnl|Mm7|chr3 (89477179-89476881)
               

               
               3-316, gnl|monDom2|scaffold_59 (2744235-2743672)
               

               
               3-316, gnl|oryCun1|scaffold_210828 (44298-43849)
               

               
               3-316, gnl|panTro1|chr1 (133825581-133826034)
               

               
               3-316, gnl|rheMac2|chr1 (133595425-133595879)
               

               
               3-316, gnl|rn3|chr2 (181488305-181487896)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-316, gnl|bosTau2|chr3 (9140991-9141305)
               

               
               3-316, gnl|canFam2|chr7 (45417008-45416601)
               

               
               3-316, gnl|dasNov1|scaffold_56035 (6563-7045)
               

               
               3-316, gnl|hg17|chr1 (151836156-151836609)
               

               
               3-316, gnl|Hg17|chr1 (151836165-151836474)
               

               
               3-316, gnl|loxAfr1|scaffold_12583 (61946-61472)
               

               
               3-316, gnl|mm7|chr3 (89477190-89476781)
               

               
               3-316, gnl|Mm7|chr3 (89477179-89476881)
               

               
               3-316, gnl|monDom2|scaffold_59 (2744235-2743672)
               

               
               3-316, gnl|oryCun1|scaffold_210828 (44298-43849)
               

               
               3-316, gnl|panTro1|chr1 (133825581-133826034)
               

               
               3-316, gnl|rheMac2|chr1 (133595425-133595879)
               

               
               3-316, gnl|rn3|chr2 (181488305-181487896)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jej (0.0989218)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.0989218)

	3-316, gnl\|bosTau2\|chr3 (9140991-9141305)
	3-316, gnl\|canFam2\|chr7 (45417008-45416601)
	3-316, gnl\|dasNov1\|scaffold_56035 (6563-7045)
	3-316, gnl\|hg17\|chr1 (151836156-151836609)
	3-316, gnl\|Hg17\|chr1 (151836165-151836474)
	3-316, gnl\|loxAfr1\|scaffold_12583 (61946-61472)
	3-316, gnl\|mm7\|chr3 (89477190-89476781)
	3-316, gnl\|Mm7\|chr3 (89477179-89476881)
	3-316, gnl\|monDom2\|scaffold_59 (2744235-2743672)
	3-316, gnl\|oryCun1\|scaffold_210828 (44298-43849)
	3-316, gnl\|panTro1\|chr1 (133825581-133826034)
	3-316, gnl\|rheMac2\|chr1 (133595425-133595879)
	3-316, gnl\|rn3\|chr2 (181488305-181487896)