Non-Coding RNA Search

rjej16b_c8.y1

Sequence:


               
               GAATGTTTAAGTACTATGGGTATTAAATAGAGTCTTAAAAAATATTTGTAGTCCCATTAT
TTTTAATATCACTTTCTTTGGGTAATTTCTGATTAAAAAAAAATTTCCTTTGGCTGTTAG
AATTATTAAGATTTTCAGTGTGTTTGTGTGATGTGCGTTTGCACACATTGTCATGAAGGA
ATTCTCTAGCCAACTTCAAAGAAAGAAAGGAAAAAAAAAAAGAATGGTCCTAAATTAGGT
GTGTAAAAGCCTGTAGAGTTCAGGACGCTTGCACTGAAGATATATCTTAAAGTCCTGAAA
CTTAGAAGCAATTCCACTGGAGAAGAAGCACTGTTGAGTTCATACTGTCAGTGAACAGCT
GAAACATTTCACAGCTTTCACCTCTGGGAAATACTGGGGAAAATTTTTAAATGTAAAATT
TCACTTCAGTTAGTTGCGGGCTGAACTCAACTTGAAAAATCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATGTTTAAGTACTATGGGTATTAAATAGAGTCTTAAAAAATATTTGTAGTCCCATTAT
TTTTAATATCACTTTCTTTGGGTAATTTCTGATTAAAAAAAAATTTCCTTTGGCTGTTAG
AATTATTAAGATTTTCAGTGTGTTTGTGTGATGTGCGTTTGCACACATTGTCATGAAGGA
ATTCTCTAGCCAACTTCAAAGAAAGAAAGGAAAAAAAAAAAGAATGGTCCTAAATTAGGT
GTGTAAAAGCCTGTAGAGTTCAGGACGCTTGCACTGAAGATATATCTTAAAGTCCTGAAA
CTTAGAAGCAATTCCACTGGAGAAGAAGCACTGTTGAGTTCATACTGTCAGTGAACAGCT
GAAACATTTCACAGCTTTCACCTCTGGGAAATACTGGGGAAAATTTTTAAATGTAAAATT
TCACTTCAGTTAGTTGCGGGCTGAACTCAACTTGAAAAATCT

Aligned organism(s): 14 entry(ies)

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Aligned organism(s): 14 entry(ies)

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               1-462, gnl|bosTau2|chr10 (9152248-9151793)
               

               
               1-462, gnl|canFam2|chr30 (32994100-32994898)
               

               
               1-462, gnl|dasNov1|scaffold_138729 (4043-3237)
               

               
               1-462, gnl|echTel1|scaffold_164422 (540-1312)
               

               
               1-462, gnl|hg17|chr15 (63739070-63739891)
               

               
               1-462, gnl|Hg17|chr15 (63740046-63739594)
               

               
               1-462, gnl|loxAfr1|scaffold_3574 (72499-73278)
               

               
               1-462, gnl|mm7|chr9 (64948828-64948026)
               

               
               1-462, gnl|Mm7|chr9 (64947863-64948309)
               

               
               1-462, gnl|monDom2|scaffold_12 (47454493-47453668)
               

               
               1-462, gnl|oryCun1|scaffold_196940 (13370-14134)
               

               
               1-462, gnl|panTro1|chr16 (64233151-64233972)
               

               
               1-462, gnl|rheMac2|chr7 (44150113-44150951)
               

               
               1-462, gnl|rn3|chr8 (69189615-69188835)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-462, gnl|bosTau2|chr10 (9152248-9151793)
               

               
               1-462, gnl|canFam2|chr30 (32994100-32994898)
               

               
               1-462, gnl|dasNov1|scaffold_138729 (4043-3237)
               

               
               1-462, gnl|echTel1|scaffold_164422 (540-1312)
               

               
               1-462, gnl|hg17|chr15 (63739070-63739891)
               

               
               1-462, gnl|Hg17|chr15 (63740046-63739594)
               

               
               1-462, gnl|loxAfr1|scaffold_3574 (72499-73278)
               

               
               1-462, gnl|mm7|chr9 (64948828-64948026)
               

               
               1-462, gnl|Mm7|chr9 (64947863-64948309)
               

               
               1-462, gnl|monDom2|scaffold_12 (47454493-47453668)
               

               
               1-462, gnl|oryCun1|scaffold_196940 (13370-14134)
               

               
               1-462, gnl|panTro1|chr16 (64233151-64233972)
               

               
               1-462, gnl|rheMac2|chr7 (44150113-44150951)
               

               
               1-462, gnl|rn3|chr8 (69189615-69188835)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               jej (0.0989218)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.0989218)

	1-462, gnl\|bosTau2\|chr10 (9152248-9151793)
	1-462, gnl\|canFam2\|chr30 (32994100-32994898)
	1-462, gnl\|dasNov1\|scaffold_138729 (4043-3237)
	1-462, gnl\|echTel1\|scaffold_164422 (540-1312)
	1-462, gnl\|hg17\|chr15 (63739070-63739891)
	1-462, gnl\|Hg17\|chr15 (63740046-63739594)
	1-462, gnl\|loxAfr1\|scaffold_3574 (72499-73278)
	1-462, gnl\|mm7\|chr9 (64948828-64948026)
	1-462, gnl\|Mm7\|chr9 (64947863-64948309)
	1-462, gnl\|monDom2\|scaffold_12 (47454493-47453668)
	1-462, gnl\|oryCun1\|scaffold_196940 (13370-14134)
	1-462, gnl\|panTro1\|chr16 (64233151-64233972)
	1-462, gnl\|rheMac2\|chr7 (44150113-44150951)
	1-462, gnl\|rn3\|chr8 (69189615-69188835)