Non-Coding RNA Search

rjej21b_p8.y1

Sequence:


               
               CAACTGCGAGCTCTCGTGTGTGTGCACACACGCACGCATGCACACACACAGGCACGCCCG
TTACAGCAGGTGGGGGAAGAGGCCGCCGGGGCCACGGAAGGCCGGGCAGACGAGGAGACC
TGGGTGCAAACACTGCAGAAACCTCTTCAAAATATTTGGGTTTGTCCAAATCCTAAACCG
CCGTTACCAGGCACTTTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAACTGCGAGCTCTCGTGTGTGTGCACACACGCACGCATGCACACACACAGGCACGCCCG
TTACAGCAGGTGGGGGAAGAGGCCGCCGGGGCCACGGAAGGCCGGGCAGACGAGGAGACC
TGGGTGCAAACACTGCAGAAACCTCTTCAAAATATTTGGGTTTGTCCAAATCCTAAACCG
CCGTTACCAGGCACTTTTC

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               25-199, gnl|bosTau2|chr16 (35923185-35923365)
               

               
               25-199, gnl|canFam2|chr5 (60841081-60841729)
               

               
               25-199, gnl|hg17|chr1 (3165014-3165797)
               

               
               25-199, gnl|Hg17|chr1 (3165269-3165017)
               

               
               25-199, gnl|mm7|chr4 (153484298-153483526)
               

               
               25-199, gnl|Mm7|chr4 (153484072-153484293)
               

               
               25-199, gnl|panTro1|chr1 (3015971-3016744)
               

               
               25-199, gnl|rheMac2|chr1 (6181028-6181986)
               

               
               25-199, gnl|rn3|chr5 (171302090-171301332)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               25-199, gnl|bosTau2|chr16 (35923185-35923365)
               

               
               25-199, gnl|canFam2|chr5 (60841081-60841729)
               

               
               25-199, gnl|hg17|chr1 (3165014-3165797)
               

               
               25-199, gnl|Hg17|chr1 (3165269-3165017)
               

               
               25-199, gnl|mm7|chr4 (153484298-153483526)
               

               
               25-199, gnl|Mm7|chr4 (153484072-153484293)
               

               
               25-199, gnl|panTro1|chr1 (3015971-3016744)
               

               
               25-199, gnl|rheMac2|chr1 (6181028-6181986)
               

               
               25-199, gnl|rn3|chr5 (171302090-171301332)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jej (0.0989218)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.0989218)

	25-199, gnl\|bosTau2\|chr16 (35923185-35923365)
	25-199, gnl\|canFam2\|chr5 (60841081-60841729)
	25-199, gnl\|hg17\|chr1 (3165014-3165797)
	25-199, gnl\|Hg17\|chr1 (3165269-3165017)
	25-199, gnl\|mm7\|chr4 (153484298-153483526)
	25-199, gnl\|Mm7\|chr4 (153484072-153484293)
	25-199, gnl\|panTro1\|chr1 (3015971-3016744)
	25-199, gnl\|rheMac2\|chr1 (6181028-6181986)
	25-199, gnl\|rn3\|chr5 (171302090-171301332)