rjej32b_a8.y1
|
ATCGGCGGCGGCGGCGGTGATGGCAGTGCTGATCTGAAGATGGAAAGAGCCAGGCGAAGG
GGAGGCGGCGGCGGCGGCGGCCGTGGCCGCGGCGGCAAGAATGTAGGGGGCTCTGGCCTA
AGCAAGAGTAGACTCTATCCCCAGGCCCAGCACCCCCACTACCCCCACTACGCGGCTTCA
GCCACCCCTAGTCAGGCTGGGGGCGCCGCCGAAATCCAGGAGCTGGCCTCTAAACGAGTG
GACATCCAGAAAAAAAGGTTTTACCTAGACGTGAAGCAAAGCTCCCGGGGCCGGTTCCTA
AAGATAGCCGAAGTCTGGATAGGGAGAGGCCGGCAAGACAATATCAGAAAGAGTAAACTG
ACCCTCTCCCTGTCTGTGGCAGCGGAGCTGAAGGACTGCCTAGGGGACTTCATCGAGCAC
TATGCCCACCTGGGCCTGAAAGGCCACCGACAAGAGCATGGTCACGGCAAAGAGCAAAGC
TCCAGGAGGAGACAGAAGCACTCAGCACCCTCCCCACCAGTCTCTGTAGGGTCCGAAGAG
CATCCTCACAGTGTCCTCAAGACAGACTACATAGAGAGGGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATCGGCGGCGGCGGCGGTGATGGCAGTGCTGATCTGAAGATGGAAAGAGCCAGGCGAAGG
GGAGGCGGCGGCGGCGGCGGCCGTGGCCGCGGCGGCAAGAATGTAGGGGGCTCTGGCCTA
AGCAAGAGTAGACTCTATCCCCAGGCCCAGCACCCCCACTACCCCCACTACGCGGCTTCA
GCCACCCCTAGTCAGGCTGGGGGCGCCGCCGAAATCCAGGAGCTGGCCTCTAAACGAGTG
GACATCCAGAAAAAAAGGTTTTACCTAGACGTGAAGCAAAGCTCCCGGGGCCGGTTCCTA
AAGATAGCCGAAGTCTGGATAGGGAGAGGCCGGCAAGACAATATCAGAAAGAGTAAACTG
ACCCTCTCCCTGTCTGTGGCAGCGGAGCTGAAGGACTGCCTAGGGGACTTCATCGAGCAC
TATGCCCACCTGGGCCTGAAAGGCCACCGACAAGAGCATGGTCACGGCAAAGAGCAAAGC
TCCAGGAGGAGACAGAAGCACTCAGCACCCTCCCCACCAGTCTCTGTAGGGTCCGAAGAG
CATCCTCACAGTGTCCTCAAGACAGACTACATAGAGAGGGA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
84-307, - strand, RNAmicro p=0.99802 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
84-307, - strand, RNAmicro p=0.99802 |
|
97-309, DB470104 RIKEN full-length enriched human cDNA library, hippocampus
(dbj|DB470104.1|), blast E-value=0, identity=92.02% |
|
97-309, xv19d07.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone (gb|AW303465.1|),
blast E-value=0, identity=93.43% |
|
97-307, 7o97h12.x1 NCI_CGAP_Ov18 Homo sapiens cDNA clone IMAGE (gb|BF434036.1|),
blast E-value=0, identity=91.94% |
|
97-309, 7o98h12.x1 NCI_CGAP_Ov18 Homo sapiens cDNA clone IMAGE (gb|BF434119.1|),
blast E-value=0, identity=93.43% |
|
97-309, 603193085F1 NIH_MGC_95 Homo sapiens cDNA clone IMAGE (gb|BI550191.1|),
blast E-value=0, identity=93.43% |
|
97-309, TC115300 Human fetal brain, large insert, pCMV expression library
(gb|DR003356.1|), blast E-value=0, identity=93.43% |
PigEST conread start position and end position of sequence similarity to another annotated EST (NCBI dbEST),
transcript identifier and annotation,
blast E-value,
PigEST conread identity to the similar transcript
|
97-309, DB470104 RIKEN full-length enriched human cDNA library, hippocampus
(dbj|DB470104.1|), blast E-value=0, identity=92.02% |
|
97-309, xv19d07.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone (gb|AW303465.1|),
blast E-value=0, identity=93.43% |
|
97-307, 7o97h12.x1 NCI_CGAP_Ov18 Homo sapiens cDNA clone IMAGE (gb|BF434036.1|),
blast E-value=0, identity=91.94% |
|
97-309, 7o98h12.x1 NCI_CGAP_Ov18 Homo sapiens cDNA clone IMAGE (gb|BF434119.1|),
blast E-value=0, identity=93.43% |
|
97-309, 603193085F1 NIH_MGC_95 Homo sapiens cDNA clone IMAGE (gb|BI550191.1|),
blast E-value=0, identity=93.43% |
|
97-309, TC115300 Human fetal brain, large insert, pCMV expression library
(gb|DR003356.1|), blast E-value=0, identity=93.43% |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
