Non-Coding RNA Search

rjej32b_j16.y1

Sequence:


               
               GAAGAGCTGGGTCTGATCGAGCAAGCTTATGACAACCCCCATGAGGCGTGTCCCGCATCA
AGCGTCACCTTCTCACACAGAGAGCCTTCAAAGAAGTAGGCATAGAGTTCATGGATCTCT
ATAGCCACCTGGTGCCAGTGTATGATGTGGAGCCCCTGGAGAAAATCACTGATGCCTACC
TGGACCAGTACCTCTGGTACGAAGCTGACAAGCGCCGCCTTTTCCCGCCCTGGATCAAGC
CTGCTGACACAGAACCGCCGCCTCTGCTTGTTTACAAGTGGTGCCAAGGCATCAATAACC
TGCAGGACGTGTGGGAGACAAGCGAGGGCGAGTGCAACGTCATGCTGGAGTCACGATTTG
AGAAGATGTATGAGAAGATCGACCTGACCCTGCTGAACAGGCTGCTGCGCCTCATCGTAG
ACCACAACATCGCTGACTACATGACTGCCAAGAACAACGTCGTCATCAACTACAAGGACA
TGAACCATACAAATTCGTATGGGATCATCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGAGCTGGGTCTGATCGAGCAAGCTTATGACAACCCCCATGAGGCGTGTCCCGCATCA
AGCGTCACCTTCTCACACAGAGAGCCTTCAAAGAAGTAGGCATAGAGTTCATGGATCTCT
ATAGCCACCTGGTGCCAGTGTATGATGTGGAGCCCCTGGAGAAAATCACTGATGCCTACC
TGGACCAGTACCTCTGGTACGAAGCTGACAAGCGCCGCCTTTTCCCGCCCTGGATCAAGC
CTGCTGACACAGAACCGCCGCCTCTGCTTGTTTACAAGTGGTGCCAAGGCATCAATAACC
TGCAGGACGTGTGGGAGACAAGCGAGGGCGAGTGCAACGTCATGCTGGAGTCACGATTTG
AGAAGATGTATGAGAAGATCGACCTGACCCTGCTGAACAGGCTGCTGCGCCTCATCGTAG
ACCACAACATCGCTGACTACATGACTGCCAAGAACAACGTCGTCATCAACTACAAGGACA
TGAACCATACAAATTCGTATGGGATCATCAG

Aligned organism(s): 19 entry(ies)

More info

Aligned organism(s): 19 entry(ies)

Help | Less info


               
               96-289, gnl|bosTau2|chr19 (17312735-17312542)
               

               
               96-289, gnl|canFam2|chr9 (49143523-49143743)
               

               
               96-289, gnl|danRer3|chr14 (38572881-38572666)
               

               
               96-289, gnl|dasNov1|scaffold_54638 (2581-2801)
               

               
               96-289, gnl|echTel1|scaffold_318383 (61882-62101)
               

               
               96-289, gnl|fr1|chrUn (84986185-84985965)
               

               
               96-289, gnl|galGal2|chr19 (5042209-5042432)
               

               
               96-289, gnl|hg17|chr17 (1525658-1525878)
               

               
               96-289, gnl|Hg17|chr17 (1525856-1525663)
               

               
               96-289, gnl|loxAfr1|scaffold_84919 (2603-2823)
               

               
               96-289, gnl|mm7|chr11 (75576448-75576228)
               

               
               96-289, gnl|Mm7|chr11 (75576248-75576441)
               

               
               96-289, gnl|monDom2|scaffold_86 (2830719-2830939)
               

               
               96-289, gnl|oryCun1|scaffold_200944 (61924-62144)
               

               
               96-289, gnl|panTro1|chr19_random (6552065-6551845)
               

               
               96-289, gnl|rheMac2|chr16 (1479946-1480166)
               

               
               96-289, gnl|rn3|chr10 (62829096-62828876)
               

               
               96-289, gnl|tetNig1|chr10 (10160093-10160313)
               

               
               96-289, gnl|xenTro1|scaffold_416 (804716-804499)

Aligned organism(s): 19 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               96-289, gnl|bosTau2|chr19 (17312735-17312542)
               

               
               96-289, gnl|canFam2|chr9 (49143523-49143743)
               

               
               96-289, gnl|danRer3|chr14 (38572881-38572666)
               

               
               96-289, gnl|dasNov1|scaffold_54638 (2581-2801)
               

               
               96-289, gnl|echTel1|scaffold_318383 (61882-62101)
               

               
               96-289, gnl|fr1|chrUn (84986185-84985965)
               

               
               96-289, gnl|galGal2|chr19 (5042209-5042432)
               

               
               96-289, gnl|hg17|chr17 (1525658-1525878)
               

               
               96-289, gnl|Hg17|chr17 (1525856-1525663)
               

               
               96-289, gnl|loxAfr1|scaffold_84919 (2603-2823)
               

               
               96-289, gnl|mm7|chr11 (75576448-75576228)
               

               
               96-289, gnl|Mm7|chr11 (75576248-75576441)
               

               
               96-289, gnl|monDom2|scaffold_86 (2830719-2830939)
               

               
               96-289, gnl|oryCun1|scaffold_200944 (61924-62144)
               

               
               96-289, gnl|panTro1|chr19_random (6552065-6551845)
               

               
               96-289, gnl|rheMac2|chr16 (1479946-1480166)
               

               
               96-289, gnl|rn3|chr10 (62829096-62828876)
               

               
               96-289, gnl|tetNig1|chr10 (10160093-10160313)
               

               
               96-289, gnl|xenTro1|scaffold_416 (804716-804499)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               jej (0.0989218)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.0989218)

	96-289, gnl\|bosTau2\|chr19 (17312735-17312542)
	96-289, gnl\|canFam2\|chr9 (49143523-49143743)
	96-289, gnl\|danRer3\|chr14 (38572881-38572666)
	96-289, gnl\|dasNov1\|scaffold_54638 (2581-2801)
	96-289, gnl\|echTel1\|scaffold_318383 (61882-62101)
	96-289, gnl\|fr1\|chrUn (84986185-84985965)
	96-289, gnl\|galGal2\|chr19 (5042209-5042432)
	96-289, gnl\|hg17\|chr17 (1525658-1525878)
	96-289, gnl\|Hg17\|chr17 (1525856-1525663)
	96-289, gnl\|loxAfr1\|scaffold_84919 (2603-2823)
	96-289, gnl\|mm7\|chr11 (75576448-75576228)
	96-289, gnl\|Mm7\|chr11 (75576248-75576441)
	96-289, gnl\|monDom2\|scaffold_86 (2830719-2830939)
	96-289, gnl\|oryCun1\|scaffold_200944 (61924-62144)
	96-289, gnl\|panTro1\|chr19_random (6552065-6551845)
	96-289, gnl\|rheMac2\|chr16 (1479946-1480166)
	96-289, gnl\|rn3\|chr10 (62829096-62828876)
	96-289, gnl\|tetNig1\|chr10 (10160093-10160313)
	96-289, gnl\|xenTro1\|scaffold_416 (804716-804499)