rjej37b_c18.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCTTCCGAGCCTCTGGAGAAAACGTTCAAAGGCAGCGGCCACTGGGGTCCCGCCCGGGG ACTGGCGGGCAGCGGAAGCCTCCAGGGCAAAGGAGTCACCTCGGCCTCAGCCTCCCAGCT GAGTGTATCTGGCCAGGCCTCTGCGGGCAGCACCCAGCTTCAGCTCCACAGCCTCTTGAG CAGTATTGGCAGCAGGGAGGGCACCTATGCCAAGCTGGGGGGGCTCTACGCCCAGTCCCT GGTCCGCCTCGTGGCCAAGTGTGAGGACCTCTTCATGGGTGGCCAGAAAAAGGAACTGCA CTTCAGCGAGAATAACTGGTCCCTTTTCAAGCTGACCTGTAACAAGCCCTGCTGTGACTC GGGGGATGCCATTTATTACTGCGCCACCTGTTCTGAGGACCCCGGCAGCACCTATGCTGT GAAAATCTGCAAAACCCCTGAGCCCAAAGCAGCCTCCTACTGCAGTCCTTCCGTGCCAGT GCACTTCAACATCCAGCAGGACTGTGGCCACTTTGTCGCCTCCGTGCCCTCCAGCATTGC TCACCTCTCCGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCTTCCGAGCCTCTGGAGAAAACGTTCAAAGGCAGCGGCCACTGGGGTCCCGCCCGGGG ACTGGCGGGCAGCGGAAGCCTCCAGGGCAAAGGAGTCACCTCGGCCTCAGCCTCCCAGCT GAGTGTATCTGGCCAGGCCTCTGCGGGCAGCACCCAGCTTCAGCTCCACAGCCTCTTGAG CAGTATTGGCAGCAGGGAGGGCACCTATGCCAAGCTGGGGGGGCTCTACGCCCAGTCCCT GGTCCGCCTCGTGGCCAAGTGTGAGGACCTCTTCATGGGTGGCCAGAAAAAGGAACTGCA CTTCAGCGAGAATAACTGGTCCCTTTTCAAGCTGACCTGTAACAAGCCCTGCTGTGACTC GGGGGATGCCATTTATTACTGCGCCACCTGTTCTGAGGACCCCGGCAGCACCTATGCTGT GAAAATCTGCAAAACCCCTGAGCCCAAAGCAGCCTCCTACTGCAGTCCTTCCGTGCCAGT GCACTTCAACATCCAGCAGGACTGTGGCCACTTTGTCGCCTCCGTGCCCTCCAGCATTGC TCACCTCTCCGGA |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 102-301, - strand, RNAz p=0.788565 | |
| 425-553, - strand, RNAz p=0.839503 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 102-301, - strand, RNAz p=0.788565 | |
| 425-553, - strand, RNAz p=0.839503 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 1-423, gnl|bosTau2|chr27 (15808491-15808913) | |
| 1-423, gnl|Hg17|chr8 (8223077-8222637) | |
| 1-423, gnl|Mm7|chr8 (34905029-34905469) | |
| 425-553, gnl|bosTau2|chr27 (15814403-15814530) | |
| 425-553, gnl|Hg17|chr8 (8214228-8214101) | |
| 425-553, gnl|Mm7|chr8 (34911660-34911787) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-423, gnl|bosTau2|chr27 (15808491-15808913) | |
| 1-423, gnl|Hg17|chr8 (8223077-8222637) | |
| 1-423, gnl|Mm7|chr8 (34905029-34905469) | |
| 425-553, gnl|bosTau2|chr27 (15814403-15814530) | |
| 425-553, gnl|Hg17|chr8 (8214228-8214101) | |
| 425-553, gnl|Mm7|chr8 (34911660-34911787) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jej (0.0989218) |