rjej39b_k24.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGCGGCCCCGCTCATCCCTCTCTCCCAGCAGATTCCTACTGGAAATCCATTATATGAAT CTTATTACAAGCAGGTAGACCCAGCATACACAGGGCGAGTTGGGGCCAGTGAAGCTGCAC TTTTTCTAAAGAAGTCTGGGCTCTCAGACATTATCCTTGGGAAGATATGGGACTTGGCCG ATCCAGAAGGTAAAGGGTTCTTGGACAAACAGGGTTTCTATGTTGCACTGAGACTAGTGG CCTGTGCACAGAGCGGCCACGAAGTTACCTTGAGCAATCTGAATTTGAACATGCCGCCGC CCAAATTTCATGACACCAGCAGCCCTTTGATGGTTACACCACCTTCTGCAGAGGCCCATT GGGCTGTGAGGGTAGAAGAAAAGGCAAAATTCGATGGCATTTTTGAAAGCCTCTTACCCA TCAATGGTTTGCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAACTCGAAGCTGCCTC TTGATGTCCTGGGCCGGGTCTGGGACCTCAGTGACATTGACAAGGACGGGCACCTGGACA GAGATGAGTTTGCTGTGGCCATGCACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGCGGCCCCGCTCATCCCTCTCTCCCAGCAGATTCCTACTGGAAATCCATTATATGAAT CTTATTACAAGCAGGTAGACCCAGCATACACAGGGCGAGTTGGGGCCAGTGAAGCTGCAC TTTTTCTAAAGAAGTCTGGGCTCTCAGACATTATCCTTGGGAAGATATGGGACTTGGCCG ATCCAGAAGGTAAAGGGTTCTTGGACAAACAGGGTTTCTATGTTGCACTGAGACTAGTGG CCTGTGCACAGAGCGGCCACGAAGTTACCTTGAGCAATCTGAATTTGAACATGCCGCCGC CCAAATTTCATGACACCAGCAGCCCTTTGATGGTTACACCACCTTCTGCAGAGGCCCATT GGGCTGTGAGGGTAGAAGAAAAGGCAAAATTCGATGGCATTTTTGAAAGCCTCTTACCCA TCAATGGTTTGCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAACTCGAAGCTGCCTC TTGATGTCCTGGGCCGGGTCTGGGACCTCAGTGACATTGACAAGGACGGGCACCTGGACA GAGATGAGTTTGCTGTGGCCATGCACT |
| Aligned organism(s): 53 entry(ies) | More info |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
| 72-172, gnl|bosTau2|chr7 (5670851-5670751) | |
| 72-172, gnl|canFam2|chr20 (49092328-49092200) | |
| 72-172, gnl|danRer3|chr22 (14674889-14674771) | |
| 72-172, gnl|echTel1|scaffold_307929 (552-444) | |
| 72-172, gnl|fr1|chrUn (18658870-18658751) | |
| 72-172, gnl|galGal2|chr28 (3635514-3635391) | |
| 72-172, gnl|hg17|chr19 (16413682-16413811) | |
| 72-172, gnl|Hg17|chr19 (16413795-16413695) | |
| 72-172, gnl|loxAfr1|scaffold_53449 (6471-6600) | |
| 72-172, gnl|mm7|chr8 (70922552-70922680) | |
| 72-172, gnl|Mm7|chr8 (70922664-70922564) | |
| 72-172, gnl|monDom2|scaffold_100 (2979671-2979804) | |
| 72-172, gnl|oryCun1|scaffold_127443 (10996-10868) | |
| 72-172, gnl|panTro1|chr20 (17096591-17096720) | |
| 72-172, gnl|rheMac2|chr19 (15984416-15984545) | |
| 72-172, gnl|rn3|chr16 (17861743-17861616) | |
| 72-172, gnl|tetNig1|chr15_random (2694408-2694516) | |
| 72-172, gnl|xenTro1|scaffold_1177 (72299-72195) | |
| 199-308, gnl|bosTau2|chr7 (5668465-5668356) | |
| 199-308, gnl|canFam2|chr20 (49094731-49094607) | |
| 199-308, gnl|danRer3|chr22 (14676907-14676794) | |
| 199-308, gnl|echTel1|scaffold_307929 (3215-3091) | |
| 199-308, gnl|fr1|chrUn (18659164-18659051) | |
| 199-308, gnl|galGal2|chr28 (3636711-3636600) | |
| 199-308, gnl|hg17|chr19 (16409572-16409696) | |
| 199-308, gnl|Hg17|chr19 (16409690-16409581) | |
| 199-308, gnl|loxAfr1|scaffold_53449 (2822-2945) | |
| 199-308, gnl|mm7|chr8 (70919788-70919912) | |
| 199-308, gnl|Mm7|chr8 (70919906-70919797) | |
| 199-308, gnl|monDom2|scaffold_100 (2977599-2977720) | |
| 199-308, gnl|oryCun1|scaffold_127443 (13515-13391) | |
| 199-308, gnl|panTro1|chr20 (17092500-17092624) | |
| 199-308, gnl|rheMac2|chr19 (15980140-15980264) | |
| 199-308, gnl|rn3|chr16 (17866095-17865971) | |
| 199-308, gnl|tetNig1|chr15_random (2694102-2694211) | |
| 199-308, gnl|xenTro1|scaffold_1177 (76707-76579) | |
| 371-499, gnl|bosTau2|chr7 (5660375-5660247) | |
| 371-499, gnl|canFam2|chr20 (49098998-49098843) | |
| 371-499, gnl|danRer3|chr22 (14677267-14677131) | |
| 371-499, gnl|fr1|chrUn (18659507-18659369) | |
| 371-499, gnl|galGal2|chr28 (3638092-3637935) | |
| 371-499, gnl|hg17|chr19 (16406170-16406327) | |
| 371-499, gnl|Hg17|chr19 (16406302-16406174) | |
| 371-499, gnl|loxAfr1|scaffold_10494 (41548-41704) | |
| 371-499, gnl|mm7|chr8 (70914780-70914933) | |
| 371-499, gnl|Mm7|chr8 (70914911-70914783) | |
| 371-499, gnl|monDom2|scaffold_100 (2972892-2973048) | |
| 371-499, gnl|oryCun1|scaffold_127443 (16703-16547) | |
| 371-499, gnl|panTro1|chr20 (17089096-17089253) | |
| 371-499, gnl|rheMac2|chr19 (15975490-15975647) | |
| 371-499, gnl|rn3|chr16 (17870653-17870497) | |
| 371-499, gnl|tetNig1|chr15_random (2693759-2693897) | |
| 371-499, gnl|xenTro1|scaffold_1177 (78780-78631) |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 72-172, gnl|bosTau2|chr7 (5670851-5670751) | |
| 72-172, gnl|canFam2|chr20 (49092328-49092200) | |
| 72-172, gnl|danRer3|chr22 (14674889-14674771) | |
| 72-172, gnl|echTel1|scaffold_307929 (552-444) | |
| 72-172, gnl|fr1|chrUn (18658870-18658751) | |
| 72-172, gnl|galGal2|chr28 (3635514-3635391) | |
| 72-172, gnl|hg17|chr19 (16413682-16413811) | |
| 72-172, gnl|Hg17|chr19 (16413795-16413695) | |
| 72-172, gnl|loxAfr1|scaffold_53449 (6471-6600) | |
| 72-172, gnl|mm7|chr8 (70922552-70922680) | |
| 72-172, gnl|Mm7|chr8 (70922664-70922564) | |
| 72-172, gnl|monDom2|scaffold_100 (2979671-2979804) | |
| 72-172, gnl|oryCun1|scaffold_127443 (10996-10868) | |
| 72-172, gnl|panTro1|chr20 (17096591-17096720) | |
| 72-172, gnl|rheMac2|chr19 (15984416-15984545) | |
| 72-172, gnl|rn3|chr16 (17861743-17861616) | |
| 72-172, gnl|tetNig1|chr15_random (2694408-2694516) | |
| 72-172, gnl|xenTro1|scaffold_1177 (72299-72195) | |
| 199-308, gnl|bosTau2|chr7 (5668465-5668356) | |
| 199-308, gnl|canFam2|chr20 (49094731-49094607) | |
| 199-308, gnl|danRer3|chr22 (14676907-14676794) | |
| 199-308, gnl|echTel1|scaffold_307929 (3215-3091) | |
| 199-308, gnl|fr1|chrUn (18659164-18659051) | |
| 199-308, gnl|galGal2|chr28 (3636711-3636600) | |
| 199-308, gnl|hg17|chr19 (16409572-16409696) | |
| 199-308, gnl|Hg17|chr19 (16409690-16409581) | |
| 199-308, gnl|loxAfr1|scaffold_53449 (2822-2945) | |
| 199-308, gnl|mm7|chr8 (70919788-70919912) | |
| 199-308, gnl|Mm7|chr8 (70919906-70919797) | |
| 199-308, gnl|monDom2|scaffold_100 (2977599-2977720) | |
| 199-308, gnl|oryCun1|scaffold_127443 (13515-13391) | |
| 199-308, gnl|panTro1|chr20 (17092500-17092624) | |
| 199-308, gnl|rheMac2|chr19 (15980140-15980264) | |
| 199-308, gnl|rn3|chr16 (17866095-17865971) | |
| 199-308, gnl|tetNig1|chr15_random (2694102-2694211) | |
| 199-308, gnl|xenTro1|scaffold_1177 (76707-76579) | |
| 371-499, gnl|bosTau2|chr7 (5660375-5660247) | |
| 371-499, gnl|canFam2|chr20 (49098998-49098843) | |
| 371-499, gnl|danRer3|chr22 (14677267-14677131) | |
| 371-499, gnl|fr1|chrUn (18659507-18659369) | |
| 371-499, gnl|galGal2|chr28 (3638092-3637935) | |
| 371-499, gnl|hg17|chr19 (16406170-16406327) | |
| 371-499, gnl|Hg17|chr19 (16406302-16406174) | |
| 371-499, gnl|loxAfr1|scaffold_10494 (41548-41704) | |
| 371-499, gnl|mm7|chr8 (70914780-70914933) | |
| 371-499, gnl|Mm7|chr8 (70914911-70914783) | |
| 371-499, gnl|monDom2|scaffold_100 (2972892-2973048) | |
| 371-499, gnl|oryCun1|scaffold_127443 (16703-16547) | |
| 371-499, gnl|panTro1|chr20 (17089096-17089253) | |
| 371-499, gnl|rheMac2|chr19 (15975490-15975647) | |
| 371-499, gnl|rn3|chr16 (17870653-17870497) | |
| 371-499, gnl|tetNig1|chr15_random (2693759-2693897) | |
| 371-499, gnl|xenTro1|scaffold_1177 (78780-78631) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jej (0.0989218) |