Non-Coding RNA Search

rlin02_i13r1.y1

Sequence:


               
               GCAAACACTTCTCTTAGTATCCTAGTAGCAGAATGCAATAAGTGGTCTCATAATGAACTA
CGACTTCTACTTTCCAGCCACAGAGTACCCTGTTCTGAGTTTGCACAATAAAGTGGAACT
TGAAGGGAAAAATAGAAGGTTCCTGGGCCCTCAGAAAATAACAAAGTGTAAAGTTCATAA
ACAAATATTCAGTAGCATTAAATGTTTTCCAAAGTCTTAATATTAGCAATAAAGACAAAG
GAAGCAGTAAGTTTCATATATTTAGTTCTCTGATAGAAACAAAAAGCATAATGCTAACAT
TCACTGTGACACAATATTTATTTTTCCCATTATTAAATTTTCTTCTATGATTTTACATTA
TAAAAGCATAACAGAGCTGCTGTTCAAGTTTAGAATAAGCAAATAGCTTTAAAGTTCATA
GCACTATATGTTACTTTATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAAACACTTCTCTTAGTATCCTAGTAGCAGAATGCAATAAGTGGTCTCATAATGAACTA
CGACTTCTACTTTCCAGCCACAGAGTACCCTGTTCTGAGTTTGCACAATAAAGTGGAACT
TGAAGGGAAAAATAGAAGGTTCCTGGGCCCTCAGAAAATAACAAAGTGTAAAGTTCATAA
ACAAATATTCAGTAGCATTAAATGTTTTCCAAAGTCTTAATATTAGCAATAAAGACAAAG
GAAGCAGTAAGTTTCATATATTTAGTTCTCTGATAGAAACAAAAAGCATAATGCTAACAT
TCACTGTGACACAATATTTATTTTTCCCATTATTAAATTTTCTTCTATGATTTTACATTA
TAAAAGCATAACAGAGCTGCTGTTCAAGTTTAGAATAAGCAAATAGCTTTAAAGTTCATA
GCACTATATGTTACTTTATAT

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

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               32-441, gnl|bosTau2|chr24 (7517696-7517279)
               

               
               32-441, gnl|canFam2|chr14 (14679976-14679510)
               

               
               32-441, gnl|dasNov1|scaffold_12410 (204-639)
               

               
               32-441, gnl|hg17|chr7 (123115990-123116454)
               

               
               32-441, gnl|Hg17|chr7 (123116431-123116009)
               

               
               32-441, gnl|panTro1|chr6 (125460803-125461267)
               

               
               32-441, gnl|rheMac2|chr3 (161408020-161408484)

Aligned organism(s): 7 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               32-441, gnl|bosTau2|chr24 (7517696-7517279)
               

               
               32-441, gnl|canFam2|chr14 (14679976-14679510)
               

               
               32-441, gnl|dasNov1|scaffold_12410 (204-639)
               

               
               32-441, gnl|hg17|chr7 (123115990-123116454)
               

               
               32-441, gnl|Hg17|chr7 (123116431-123116009)
               

               
               32-441, gnl|panTro1|chr6 (125460803-125461267)
               

               
               32-441, gnl|rheMac2|chr3 (161408020-161408484)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               lin (0.145603)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)

	32-441, gnl\|bosTau2\|chr24 (7517696-7517279)
	32-441, gnl\|canFam2\|chr14 (14679976-14679510)
	32-441, gnl\|dasNov1\|scaffold_12410 (204-639)
	32-441, gnl\|hg17\|chr7 (123115990-123116454)
	32-441, gnl\|Hg17\|chr7 (123116431-123116009)
	32-441, gnl\|panTro1\|chr6 (125460803-125461267)
	32-441, gnl\|rheMac2\|chr3 (161408020-161408484)