Non-Coding RNA Search

rlin03_h13.y1

Sequence:


               
               ACTGCTCCTTCTTGAACTTCAAGGCTATCACAGCCATACCCAAACTCTCAACTTCCCATC
AACAAACTGCCCAGCAGCCCCTGGTCCACACACAAGCTAAAGTTTTCCTAACAACTTCAG
GGACATCATGCTTGTCTCTTCCCAGCTGGTACTCCTTTCCCTTTTTTTCCTTTGGACTAT
TAACTTTGATATCCTCAATCATATTGCACGTTGTAAATGTGTTTATAGAAACTTAATCCT
TAGAACTCTTTTTTCTCCTCAGTTCCCTCCCTTGGAGATTCTCTCTGTTCTCCTTCTGTA
CATCTTCACCTCTATGTGGATGTCAACTGACCTCCCCTGAAAGGCATTTTTCCAGAATTT
ATTCTCTCTAGATCTAGCATTTAGTTTTGCCTGCAGAGTTAATCTTGGTCCTATATTCCC
ATTTTCCCCTTCATCATCCAAACACCATTAATTTCTTGATTCTTTACGTCTCCAACCATC
ATCCAAGCACCACTGATTTCTTGATTCTTTACATTTCCAATTATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGCTCCTTCTTGAACTTCAAGGCTATCACAGCCATACCCAAACTCTCAACTTCCCATC
AACAAACTGCCCAGCAGCCCCTGGTCCACACACAAGCTAAAGTTTTCCTAACAACTTCAG
GGACATCATGCTTGTCTCTTCCCAGCTGGTACTCCTTTCCCTTTTTTTCCTTTGGACTAT
TAACTTTGATATCCTCAATCATATTGCACGTTGTAAATGTGTTTATAGAAACTTAATCCT
TAGAACTCTTTTTTCTCCTCAGTTCCCTCCCTTGGAGATTCTCTCTGTTCTCCTTCTGTA
CATCTTCACCTCTATGTGGATGTCAACTGACCTCCCCTGAAAGGCATTTTTCCAGAATTT
ATTCTCTCTAGATCTAGCATTTAGTTTTGCCTGCAGAGTTAATCTTGGTCCTATATTCCC
ATTTTCCCCTTCATCATCCAAACACCATTAATTTCTTGATTCTTTACGTCTCCAACCATC
ATCCAAGCACCACTGATTTCTTGATTCTTTACATTTCCAATTATC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               235-346, - strand, RNAz p=0.592886

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               235-346, - strand, RNAz p=0.592886

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               3-368, gnl|bosTau2|chr11 (7771275-7771645)
               

               
               3-368, gnl|Hg17|chr2 (74656608-74655907)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-368, gnl|bosTau2|chr11 (7771275-7771645)
               

               
               3-368, gnl|Hg17|chr2 (74656608-74655907)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               lin (0.145603)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)

	3-368, gnl\|bosTau2\|chr11 (7771275-7771645)
	3-368, gnl\|Hg17\|chr2 (74656608-74655907)