Non-Coding RNA Search

rlin23_o6.y1

Sequence:


               
               TTTGACCTATAAAGTTTATATCACGACATCTGTAAAAGTCAGTACACTCCATTGCTTACA
AAGTGCTAATTTCCTGGAGCCTTTTGTCTCACCAGGAGTAGTGGAAAGAATAAGGACATA
TTTACAATTAGTATTTCAAAATATCTAAAATAATCCGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGACCTATAAAGTTTATATCACGACATCTGTAAAAGTCAGTACACTCCATTGCTTACA
AAGTGCTAATTTCCTGGAGCCTTTTGTCTCACCAGGAGTAGTGGAAAGAATAAGGACATA
TTTACAATTAGTATTTCAAAATATCTAAAATAATCCGAG

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

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               3-159, gnl|bosTau2|chr2 (26003119-26002963)
               

               
               3-159, gnl|canFam2|chr36 (8717084-8717312)
               

               
               3-159, gnl|dasNov1|scaffold_55633 (5736-5963)
               

               
               3-159, gnl|echTel1|scaffold_310481 (11359-11652)
               

               
               3-159, gnl|galGal2|chr7 (22700791-22700599)
               

               
               3-159, gnl|hg17|chr2 (160638144-160638369)
               

               
               3-159, gnl|Hg17|chr2 (160638388-160638241)
               

               
               3-159, gnl|loxAfr1|scaffold_29624 (14300-14068)
               

               
               3-159, gnl|mm7|chr2 (60363523-60363730)
               

               
               3-159, gnl|Mm7|chr2 (60363749-60363620)
               

               
               3-159, gnl|monDom2|scaffold_2 (54040291-54040517)
               

               
               3-159, gnl|oryCun1|scaffold_205254 (146983-146763)
               

               
               3-159, gnl|panTro1|chr13 (50013814-50014039)
               

               
               3-159, gnl|rheMac2|chr12 (23499064-23499297)
               

               
               3-159, gnl|rn3|chr3 (42031475-42031697)

Aligned organism(s): 15 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-159, gnl|bosTau2|chr2 (26003119-26002963)
               

               
               3-159, gnl|canFam2|chr36 (8717084-8717312)
               

               
               3-159, gnl|dasNov1|scaffold_55633 (5736-5963)
               

               
               3-159, gnl|echTel1|scaffold_310481 (11359-11652)
               

               
               3-159, gnl|galGal2|chr7 (22700791-22700599)
               

               
               3-159, gnl|hg17|chr2 (160638144-160638369)
               

               
               3-159, gnl|Hg17|chr2 (160638388-160638241)
               

               
               3-159, gnl|loxAfr1|scaffold_29624 (14300-14068)
               

               
               3-159, gnl|mm7|chr2 (60363523-60363730)
               

               
               3-159, gnl|Mm7|chr2 (60363749-60363620)
               

               
               3-159, gnl|monDom2|scaffold_2 (54040291-54040517)
               

               
               3-159, gnl|oryCun1|scaffold_205254 (146983-146763)
               

               
               3-159, gnl|panTro1|chr13 (50013814-50014039)
               

               
               3-159, gnl|rheMac2|chr12 (23499064-23499297)
               

               
               3-159, gnl|rn3|chr3 (42031475-42031697)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               lin (0.145603)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)

	3-159, gnl\|bosTau2\|chr2 (26003119-26002963)
	3-159, gnl\|canFam2\|chr36 (8717084-8717312)
	3-159, gnl\|dasNov1\|scaffold_55633 (5736-5963)
	3-159, gnl\|echTel1\|scaffold_310481 (11359-11652)
	3-159, gnl\|galGal2\|chr7 (22700791-22700599)
	3-159, gnl\|hg17\|chr2 (160638144-160638369)
	3-159, gnl\|Hg17\|chr2 (160638388-160638241)
	3-159, gnl\|loxAfr1\|scaffold_29624 (14300-14068)
	3-159, gnl\|mm7\|chr2 (60363523-60363730)
	3-159, gnl\|Mm7\|chr2 (60363749-60363620)
	3-159, gnl\|monDom2\|scaffold_2 (54040291-54040517)
	3-159, gnl\|oryCun1\|scaffold_205254 (146983-146763)
	3-159, gnl\|panTro1\|chr13 (50013814-50014039)
	3-159, gnl\|rheMac2\|chr12 (23499064-23499297)
	3-159, gnl\|rn3\|chr3 (42031475-42031697)