Non-Coding RNA Search

rlnt04c_g21.y1

Sequence:


               
               TACTTTAAATTCCCATAAATAAACAGGATCAAGAGGCCTGAACGTTTTAAGACTCTTGAA
TGCACCATCAAATGGCTTGGTTAAAGGATTCTATCCATTTACACTGCTACCGGGGGGTGT
GGGTGTATCATTTTCAACAAATGGCCAGCACTGTATTTCATAATTGGAAAGAGATTTACA
AATGGTAGAGCTATAATCGAATTTGATGTAAGCTAATAAATTCTGGTGTCTGAAAAAAAA
AAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTTTAAATTCCCATAAATAAACAGGATCAAGAGGCCTGAACGTTTTAAGACTCTTGAA
TGCACCATCAAATGGCTTGGTTAAAGGATTCTATCCATTTACACTGCTACCGGGGGGTGT
GGGTGTATCATTTTCAACAAATGGCCAGCACTGTATTTCATAATTGGAAAGAGATTTACA
AATGGTAGAGCTATAATCGAATTTGATGTAAGCTAATAAATTCTGGTGTCTGAAAAAAAA
AAAAAAAAAAA

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               30-233, gnl|bosTau2|chr4 (23820104-23819901)
               

               
               30-233, gnl|canFam2|chr18 (17532214-17531908)
               

               
               30-233, gnl|dasNov1|scaffold_15902 (52729-52995)
               

               
               30-233, gnl|echTel1|scaffold_297813 (93196-92894)
               

               
               30-233, gnl|hg17|chr7 (105147774-105148079)
               

               
               30-233, gnl|Hg17|chr7 (105147818-105148015)
               

               
               30-233, gnl|mm7|chr12 (30960898-30960617)
               

               
               30-233, gnl|oryCun1|scaffold_210006 (8127-8436)
               

               
               30-233, gnl|panTro1|chr6 (107045902-107046207)
               

               
               30-233, gnl|rheMac2|chr3 (143330328-143330633)
               

               
               30-233, gnl|rn3|chr6 (51470108-51469822)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               30-233, gnl|bosTau2|chr4 (23820104-23819901)
               

               
               30-233, gnl|canFam2|chr18 (17532214-17531908)
               

               
               30-233, gnl|dasNov1|scaffold_15902 (52729-52995)
               

               
               30-233, gnl|echTel1|scaffold_297813 (93196-92894)
               

               
               30-233, gnl|hg17|chr7 (105147774-105148079)
               

               
               30-233, gnl|Hg17|chr7 (105147818-105148015)
               

               
               30-233, gnl|mm7|chr12 (30960898-30960617)
               

               
               30-233, gnl|oryCun1|scaffold_210006 (8127-8436)
               

               
               30-233, gnl|panTro1|chr6 (107045902-107046207)
               

               
               30-233, gnl|rheMac2|chr3 (143330328-143330633)
               

               
               30-233, gnl|rn3|chr6 (51470108-51469822)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               lnt (0.142308)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)

	30-233, gnl\|bosTau2\|chr4 (23820104-23819901)
	30-233, gnl\|canFam2\|chr18 (17532214-17531908)
	30-233, gnl\|dasNov1\|scaffold_15902 (52729-52995)
	30-233, gnl\|echTel1\|scaffold_297813 (93196-92894)
	30-233, gnl\|hg17\|chr7 (105147774-105148079)
	30-233, gnl\|Hg17\|chr7 (105147818-105148015)
	30-233, gnl\|mm7\|chr12 (30960898-30960617)
	30-233, gnl\|oryCun1\|scaffold_210006 (8127-8436)
	30-233, gnl\|panTro1\|chr6 (107045902-107046207)
	30-233, gnl\|rheMac2\|chr3 (143330328-143330633)
	30-233, gnl\|rn3\|chr6 (51470108-51469822)