Non-Coding RNA Search

rlnt04c_h20.y1

Sequence:


               
               CTCTCTTAGGAATAGGTCAACACTAGCCTTCAGAAAGTGCCTAGATCTTCCTGAATGCTT
TCCTGAATTTGAGGGTGAACGTGGCTTAGATTCAAACAGGAACTTCTACTATCTGCAATA
GTCCCCGAAGACCTAGACCAAACAGTAAGCCCAGCAGGCTCTAATGTTCTAGACCTGCAC
TAAGCTATGAGCTAAGTGTGGCTATTTGAAGttaatgaaatttaaatacaatttaaaatt
cagttccgcagtggcactaaccatatgtgaagtgcataatagcctcgtgtggctggtggc
taccatatgggacagtgcagatTTTAGACAGAACCTCTCTGACACCACAGTTTTATTCAA
CATCCCTGTGTCCAGAGGTAGAGCTCATAAAATGGATTCTATCAAAGAATTGATCATTAT
GTATAAACCAAAAAACTATCTACCCAGGATAAACAGAAGTCTGTCTCATACATGGGTTAG
GTGCAGAAGTCAGCATATACGGCAAAAATAGCTTAATGTTAAATTTTTCCTCGAAAAATT
CCTTATAAAGGGGTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTCTTAGGAATAGGTCAACACTAGCCTTCAGAAAGTGCCTAGATCTTCCTGAATGCTT
TCCTGAATTTGAGGGTGAACGTGGCTTAGATTCAAACAGGAACTTCTACTATCTGCAATA
GTCCCCGAAGACCTAGACCAAACAGTAAGCCCAGCAGGCTCTAATGTTCTAGACCTGCAC
TAAGCTATGAGCTAAGTGTGGCTATTTGAAGttaatgaaatttaaatacaatttaaaatt
cagttccgcagtggcactaaccatatgtgaagtgcataatagcctcgtgtggctggtggc
taccatatgggacagtgcagatTTTAGACAGAACCTCTCTGACACCACAGTTTTATTCAA
CATCCCTGTGTCCAGAGGTAGAGCTCATAAAATGGATTCTATCAAAGAATTGATCATTAT
GTATAAACCAAAAAACTATCTACCCAGGATAAACAGAAGTCTGTCTCATACATGGGTTAG
GTGCAGAAGTCAGCATATACGGCAAAAATAGCTTAATGTTAAATTTTTCCTCGAAAAATT
CCTTATAAAGGGGTCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               59-179, gnl|bosTau2|chr11 (45343240-45343120)
               

               
               59-179, gnl|Hg17|chr2 (64606167-64606047)
               


               
               209-556, gnl|bosTau2|chr11 (45342910-45342546)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               59-179, gnl|bosTau2|chr11 (45343240-45343120)
               

               
               59-179, gnl|Hg17|chr2 (64606167-64606047)
               


               
               209-556, gnl|bosTau2|chr11 (45342910-45342546)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lnt (0.142308)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)

	59-179, gnl\|bosTau2\|chr11 (45343240-45343120)
	59-179, gnl\|Hg17\|chr2 (64606167-64606047)

	209-556, gnl\|bosTau2\|chr11 (45342910-45342546)