rlnt12c_f19.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGGGCTGCAGGCGGCCGCCAGCGCGGTGTAGGGGGCAGGCGCGGATCCCGCCACCGCCG CGCGCTCGGCCCGCCGCCGCCTCCCGCCTCCCGGCTTCCCGCTCGCCCCTGCCTCCTGCG TCCGGCCTCGGCTCGTGCCGCCTGCCTGCCTGCCGCGGAGACGGCTTCGGGCCTGAGGTC TGAACTTGTGCCCAGCGCCATGCCGAGGGAGAAGAAGGAAAGGGATGCGAAGGAACCTGA CACTATGAAAGAGGAAAGTGGCACTGATGTCTCTGTTCGCTCCAGGAAAAGGAAGGCAAA TGTGGCCGTTTTTTTGCAAGATCCAGATGAAGATGTGGCCAAAATTGACAGAACTGTGAG AAGCCAGTGTGGCAATCAGGCCTGCTCTCAGCTATTTCAACCATCTGGCTCTAGAGGGTG ACACCCAGCTTCTGCTTTCAAAACTAGAATTCATTCTTGAATGAAGAGCAGCTTAAAGCA GTTGTAATGTGACCCTTTCTGAGTCAAGGAAATGCTACCAGCACATGATACTAGAACTGG AAGAGGAGGTTGCCCTTCTCCAACAGCTGTGGGCAAGAACTGTCATGGTTAATTTGCATG CCCAATTCTCTGCACATTGAATGGAGAAGAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGGGCTGCAGGCGGCCGCCAGCGCGGTGTAGGGGGCAGGCGCGGATCCCGCCACCGCCG CGCGCTCGGCCCGCCGCCGCCTCCCGCCTCCCGGCTTCCCGCTCGCCCCTGCCTCCTGCG TCCGGCCTCGGCTCGTGCCGCCTGCCTGCCTGCCGCGGAGACGGCTTCGGGCCTGAGGTC TGAACTTGTGCCCAGCGCCATGCCGAGGGAGAAGAAGGAAAGGGATGCGAAGGAACCTGA CACTATGAAAGAGGAAAGTGGCACTGATGTCTCTGTTCGCTCCAGGAAAAGGAAGGCAAA TGTGGCCGTTTTTTTGCAAGATCCAGATGAAGATGTGGCCAAAATTGACAGAACTGTGAG AAGCCAGTGTGGCAATCAGGCCTGCTCTCAGCTATTTCAACCATCTGGCTCTAGAGGGTG ACACCCAGCTTCTGCTTTCAAAACTAGAATTCATTCTTGAATGAAGAGCAGCTTAAAGCA GTTGTAATGTGACCCTTTCTGAGTCAAGGAAATGCTACCAGCACATGATACTAGAACTGG AAGAGGAGGTTGCCCTTCTCCAACAGCTGTGGGCAAGAACTGTCATGGTTAATTTGCATG CCCAATTCTCTGCACATTGAATGGAGAAGAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 517-631, - strand, RNAz p=0.733379 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 517-631, - strand, RNAz p=0.733379 |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 13-171, gnl|bosTau2|chr18 (30084019-30083861) | |
| 13-171, gnl|echTel1|scaffold_307601 (57753-57432) | |
| 13-171, gnl|hg17|chr19 (34994680-34994976) | |
| 13-171, gnl|Hg17|chr19 (34994752-34994900) | |
| 13-171, gnl|loxAfr1|scaffold_61566 (10145-9892) | |
| 13-171, gnl|mm7|chr7 (35000310-34999994) | |
| 13-171, gnl|Mm7|chr7 (35000235-35000093) | |
| 13-171, gnl|oryCun1|scaffold_202096 (14509-14196) | |
| 13-171, gnl|panTro1|chr20 (31482039-31482335) | |
| 13-171, gnl|rn3|chr1 (90655608-90655306) | |
| 13-171, gnl|xenTro1|scaffold_8355 (6217-5925) | |
| 382-631, gnl|bosTau2|chr18 (30080637-30080390) | |
| 382-631, gnl|canFam2|chr1 (124632576-124632188) | |
| 382-631, gnl|hg17|chr19 (34997731-34998108) | |
| 382-631, gnl|Hg17|chr19 (34997936-34998187) | |
| 382-631, gnl|mm7|chr7 (34997398-34997037) | |
| 382-631, gnl|Mm7|chr7 (34997197-34996959) | |
| 382-631, gnl|oryCun1|scaffold_202096 (11439-11071) | |
| 382-631, gnl|panTro1|chr20 (31485629-31486011) | |
| 382-631, gnl|rheMac2|chr19 (36257506-36257878) | |
| 382-631, gnl|rn3|chr1 (90652244-90651893) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 13-171, gnl|bosTau2|chr18 (30084019-30083861) | |
| 13-171, gnl|echTel1|scaffold_307601 (57753-57432) | |
| 13-171, gnl|hg17|chr19 (34994680-34994976) | |
| 13-171, gnl|Hg17|chr19 (34994752-34994900) | |
| 13-171, gnl|loxAfr1|scaffold_61566 (10145-9892) | |
| 13-171, gnl|mm7|chr7 (35000310-34999994) | |
| 13-171, gnl|Mm7|chr7 (35000235-35000093) | |
| 13-171, gnl|oryCun1|scaffold_202096 (14509-14196) | |
| 13-171, gnl|panTro1|chr20 (31482039-31482335) | |
| 13-171, gnl|rn3|chr1 (90655608-90655306) | |
| 13-171, gnl|xenTro1|scaffold_8355 (6217-5925) | |
| 382-631, gnl|bosTau2|chr18 (30080637-30080390) | |
| 382-631, gnl|canFam2|chr1 (124632576-124632188) | |
| 382-631, gnl|hg17|chr19 (34997731-34998108) | |
| 382-631, gnl|Hg17|chr19 (34997936-34998187) | |
| 382-631, gnl|mm7|chr7 (34997398-34997037) | |
| 382-631, gnl|Mm7|chr7 (34997197-34996959) | |
| 382-631, gnl|oryCun1|scaffold_202096 (11439-11071) | |
| 382-631, gnl|panTro1|chr20 (31485629-31486011) | |
| 382-631, gnl|rheMac2|chr19 (36257506-36257878) | |
| 382-631, gnl|rn3|chr1 (90652244-90651893) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lnt (0.142308) |