Non-Coding RNA Search

rlnt14c_e13.y1

Sequence:


               
               CTGGTATTGAAAACAGATGAGTCTAGAGAACAAATAGCATATAAAATGTATAATATGCTG
GTATTGAGAACAGATGAGTCTATAAAACAAATAGCATATAAAACAAATGGggagtttcca
ttgtggctcagcaggttaagaacctgacacagtgtctgtgaggatgcgggttccattcct
ggccttcctcagtgggttaaggatctggcattgccacaagctgcggcgtagttttgcaca
tgtggctcagatcaggtgttgctgtgtctgtaccgtaggccagcagctgcagctctgatt
cagcccttagcctgggaacttccttatgctgtaggtgcggccctaataagAAAAAGACAA
AAAAGAAAAACCTGATATGGACAAACACAAGAGCAGAGACAACCCGAGAAGGCCTCCTGG
AGGAGGCAGTGCCCAAGCTAAGGCCTGACAGAGGAGGTGGAATTAGACAAGGCTTTGCTG
TTTATCTGCAGGTGGTCCCACCAGCAGTTTCTCCCTAGACTGTGCTATTCACTTGCGCTC
ATCTTCTCTTTTTCACAGTCATCTGTGAGTTCTACCTCAGTTGCCTCCCAAATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGTATTGAAAACAGATGAGTCTAGAGAACAAATAGCATATAAAATGTATAATATGCTG
GTATTGAGAACAGATGAGTCTATAAAACAAATAGCATATAAAACAAATGGggagtttcca
ttgtggctcagcaggttaagaacctgacacagtgtctgtgaggatgcgggttccattcct
ggccttcctcagtgggttaaggatctggcattgccacaagctgcggcgtagttttgcaca
tgtggctcagatcaggtgttgctgtgtctgtaccgtaggccagcagctgcagctctgatt
cagcccttagcctgggaacttccttatgctgtaggtgcggccctaataagAAAAAGACAA
AAAAGAAAAACCTGATATGGACAAACACAAGAGCAGAGACAACCCGAGAAGGCCTCCTGG
AGGAGGCAGTGCCCAAGCTAAGGCCTGACAGAGGAGGTGGAATTAGACAAGGCTTTGCTG
TTTATCTGCAGGTGGTCCCACCAGCAGTTTCTCCCTAGACTGTGCTATTCACTTGCGCTC
ATCTTCTCTTTTTCACAGTCATCTGTGAGTTCTACCTCAGTTGCCTCCCAAATGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               379-595, gnl|bosTau2|chr25 (32499195-32499410)
               

               
               379-595, gnl|Hg17|chr7 (99699434-99699223)
               

               
               379-595, gnl|Mm7|chr5 (136685789-136685999)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               379-595, gnl|bosTau2|chr25 (32499195-32499410)
               

               
               379-595, gnl|Hg17|chr7 (99699434-99699223)
               

               
               379-595, gnl|Mm7|chr5 (136685789-136685999)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lnt (0.142308)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)

	379-595, gnl\|bosTau2\|chr25 (32499195-32499410)
	379-595, gnl\|Hg17\|chr7 (99699434-99699223)
	379-595, gnl\|Mm7\|chr5 (136685789-136685999)